Pandoraea fibrosis: PI93_021600
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Entry
PI93_021600 CDS
T06385
Name
(GenBank) ABC transporter permease subunit
KO
K02053
putative spermidine/putrescine transport system permease protein
K02054
putative spermidine/putrescine transport system permease protein
Organism
pfib
Pandoraea fibrosis
Pathway
pfib02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pfib00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
PI93_021600
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pfib02000
]
PI93_021600
Transporters [BR:
pfib02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
PI93_021600
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BPD_transp_1
PARM
Motif
Other DBs
NCBI-ProteinID:
QHF15938
UniProt:
A0ABX6HY90
LinkDB
All DBs
Position
complement(4901772..4903478)
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AA seq
568 aa
AA seq
DB search
MAAPIVILLTVMLIYPVGQLLLLSIRGESGFTLAEYQRLFASSVYVEVLLITLKVSLYTT
FFAVLTGYPIAYRLSTLTGARKQRLLFWLLVSFWTSFLVRTFAWVVLLGRNGVVNRTLLD
LGLIDAPLSLLYSFPAVILGMVHALMPLAVLTMLSVMENIDRRLPSAASTLGARPGTVFW
RVYFPLSLPGVAAGALMVFVTSIGFFITPTLLGGRHETMITQLIIDQVMQALNWGFAGAI
SVLLLAVVLVVFLVYDRMVGLSTMAGGAGDVKAGKRRGGWSRTLGEKVLGALGSATDVLL
RAMPRYKGEQGDGFVLRAIVFLLVVFLAAPALLMIPVSFDSASALAWPPKGFSLQWYQQV
WDSPLWMQAITRSMLVGIGAGLLSMLIGTPAAFLLVRGGMRGKSAMLAFVLAPIVVPRMI
LAVGVFYFFAKIGLVGSNVGLTIAHTVVAVPYVVITMMAVLRNYDTRLDLAAYSLGARPW
ATLRRVTFPILGAGLLSSFLFAFATSFDELTIALFTSGGLSTTLPKQFWDELTMQISPVI
AAVSTCLFLFIAALIWVAERLRRRSLAT
NT seq
1707 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgccgatcgtcattttgctgacggtcatgctgatctatccggtcggccagttg
ctcttgctgagcattcgtggcgagagcggcttcacgctcgccgaatatcagcgtctgttc
gcctcgtcggtgtatgtcgaggtattgctcatcacgctcaaggtctcgctctacacgacc
ttcttcgcggtgctcacgggctatccgattgcctaccggctctcgacgcttaccggcgcg
cgcaagcagcggctgctcttctggctgctggtctcgttctggaccagcttcctggtgcgc
acgttcgcgtgggtagtgctgctcggtcgtaacggtgtcgtcaaccgcacgttgctcgat
ctgggtctgatcgacgcgccgctctcgctgctgtacagcttccccgccgtgattctcggc
atggtgcatgcgctcatgccgctggcggtgctgacgatgctctccgtcatggagaacatc
gatcgccgtctgccgagtgcggcatcgacactgggggcgcgtcccggcacggtgttctgg
cgcgtgtatttcccgctctcgctgccgggggtggcggccggtgcgctgatggtgttcgtc
acgtcgatcggcttcttcatcacgccgacgctgctgggcggacgtcatgaaaccatgatc
acgcagctcatcatcgatcaggtgatgcaggcgttgaactggggctttgccggggcgatt
tcggtgttgctgctggccgtggtgctcgtggtgtttctggtctacgaccgcatggtcggg
ctgtcgacgatggctggcggcgccggcgatgtcaaagcgggcaagcgtcgcggcggttgg
agtcgcacgctgggcgagaaggtgctcggcgcgttgggcagcgccacggatgtgctgctg
cgcgcgatgccgcgttacaagggcgagcagggtgacggattcgtgctgcgcgcgattgtc
tttttgctggtggtgtttctcgccgcgccggcgctgctgatgattccggtgtcgttcgat
tcggcctcggcactggcatggccgccgaagggcttctcgctgcagtggtatcagcaggtg
tgggattcgccgctgtggatgcaggcgatcacgcgctcgatgctggtgggtatcggtgcg
gggctgctgtcgatgctgatcggcacgcctgcggcgttcctgctggtgcgcggcggcatg
cgcggcaagtcggcgatgctcgccttcgtgctcgcgccgatcgtggtgccgcgcatgatt
ctggccgtcggcgtgttctatttcttcgccaagatcggtctggtgggctcgaacgtgggg
ctgaccattgcgcatacggtggtggccgtgccgtatgtcgtcatcacgatgatggcggtg
ctgcgcaactacgacacgcgtctcgatctggcggcttatagcctgggcgcccgtccgtgg
gccacgctgcgccgcgtgacgttcccgattctcggtgcgggcctgttgtcgtcgttcctg
ttcgcgttcgccacgtcgttcgacgaactcacgattgcgctgttcacgtcgggcggtctc
tcgaccacgttgcccaagcaattctgggacgagttgacgatgcagatctcaccggtgatt
gcggcggtctccacgtgcctgttccttttcatcgccgcactgatctgggtggccgagcgt
ttgcgccggcgcagcctcgcgacctga
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