Pandoraea fibrosis: PI93_021970
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Entry
PI93_021970 CDS
T06385
Symbol
gyrA
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
pfib
Pandoraea fibrosis
Brite
KEGG Orthology (KO) [BR:
pfib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pfib03032
]
PI93_021970 (gyrA)
03400 DNA repair and recombination proteins [BR:
pfib03400
]
PI93_021970 (gyrA)
Enzymes [BR:
pfib01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
PI93_021970 (gyrA)
DNA replication proteins [BR:
pfib03032
]
Prokaryotic type
DNA Topoisomerases
PI93_021970 (gyrA)
DNA repair and recombination proteins [BR:
pfib03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
PI93_021970 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
QHF15021
LinkDB
All DBs
Position
complement(4988049..4990682)
Genome browser
AA seq
877 aa
AA seq
DB search
MDQFAKETLPISLEEEMRRSYLDYAMSVIVGRALPDVRDGLKPVHRRALFAMHELNNDWN
RAYKKSARIVGDVIGKYHPHGDASVYDTIVRMAQPFSLRYMLVDGQGNFGSVDGDNAAAM
RYTEVRMAKIGHELLADIDKETVDFGPNYDGSEKEPLILPARIPNLLLNGSSGIAVGMAT
NIPPHNLNEVVDACLHVLQNPDATVDELIEIIPAPDFPTAGIIYGISGVREGYRTGRGRV
VMRAKTHFEDIDRGQRVAIIVDELPYQVNKRSLLERIAELVNEKRLEGISDIRDESDKSG
MRVVIELKRGEVPEVVLNNLYKHTQLQDTFGMNMVALVDGQPKLLNLREMLVHFLAHRRE
VITRRTVYELRRARERGHVLEGLAVALANIDDFIAIIKAAPTPPIAKAALMEKAWDSSVV
RDMLSRAETESLGGREAFRPEGLDPAVGMQADGMYRLSETQAQEILQMRLQRLTGLEQDK
IVSEYKDVMAQIADLLDILARPARVTAIISEELTAVRAEFGDARRSTIEHNATELDTEDL
ITPQDMVVTLSHSGYIKSMPLSEYRAQKRGGRGKQAAATKDDDWIDTLFIANTHDTILCF
SNRGRVYWIKVYEVPQGSRNSRGRPIVNMFPLQDGEKINVVLPVKEYTEDRFVFMATSLG
TVKKTPLAAFSRPLKKGIIAVNLDDGDVLIGAAITDGAHDVMLFSDSGKAVRFDENDVRP
MGREARGVRGMQLEDGQTVIALLVAENEQQSVLTATENGYGKRTSITEYTRHGRGTKGMI
AIQTSERNGRVVAATLVEPDDEIMLITTGGVLIRTRVSEIREMGRATQGVTLISLDEGTT
LSGLQRIVESDAEVAEAAENGDAQKSDDETPEADVTE
NT seq
2634 nt
NT seq
+upstream
nt +downstream
nt
atggatcagttcgccaaagaaactctcccgatttcgctcgaagaagaaatgcggcggtcg
tatctcgattacgccatgagcgtgatcgtcggccgcgctttgccggacgtgcgtgatggc
ctgaagccagttcatcgccgcgcactgttcgccatgcacgagctgaacaacgactggaac
cgggcgtacaagaaatcggcgcgtatcgtcggtgacgtcatcggtaaataccacccgcac
ggcgacgcctctgtatacgacaccatcgttcgtatggcccagccgttctcgctgcgttat
atgctggtggacggccaaggcaacttcgggtcggtcgacggcgacaacgccgctgcaatg
cgatacaccgaagtgcgcatggccaagatcggccatgagttgcttgcggacatcgacaag
gaaaccgtcgacttcggtccgaactacgacggcagcgaaaaagaaccgctcattctgccc
gcccgtatcccgaacctgctgctcaatggctcgtcggggattgccgttggcatggcgacg
aacatcccgccgcataacctgaacgaagtcgtggacgcctgtctgcacgtgctgcagaac
ccggacgccacggtcgacgaactcatcgagatcattccggcgccggacttcccgaccgcc
ggcatcatctacggcatttccggtgtgcgagagggctatcgcaccggccgtggccgtgtc
gtgatgcgagcaaagactcacttcgaggatatcgaccgcggtcagcgcgtggcgatcatc
gtcgacgagttgccgtaccaggttaacaagcgctcactgctcgagcgcattgccgaactg
gtcaacgagaagcgtctcgagggtatttccgatatccgcgacgagtccgacaagagcggt
atgcgtgtcgtgatcgaactcaagcgcggcgaagtgcctgaggtcgttctcaacaacctc
tataagcacacgcaactgcaagacacgttcggcatgaacatggtggcgctggtcgacggc
cagccgaagctgctgaacctgcgcgaaatgctggtgcacttcctcgcgcaccgtcgcgaa
gtgattactcgccgcacggtctatgagctgcggcgtgctcgtgaacgcggccatgtgctc
gaaggtctggcggtagcactcgctaacatcgatgacttcatcgcgatcatcaaggcagcg
ccgacgccgccgatcgcgaaggctgcgttgatggagaaggcgtgggattcgtcggtcgtg
cgcgacatgttgtcgcgtgccgagaccgagtcgctgggtggacgcgaagcgttccggcca
gaggggctcgaccccgccgtcggcatgcaggcggacggtatgtaccgtctgtcggagacg
caggcgcaggaaatcctgcagatgcgtctgcaacgcctgaccggcctggagcaggacaag
atcgtctccgagtacaaggacgtgatggcacagatcgccgacctgctcgacattctggcg
cgtcccgcccgtgtgacggccatcatcagcgaagagctgacggcggtgcgcgcggagttt
ggcgatgctcgtcgttcgaccatcgagcacaacgcgaccgaactcgatacggaagatctg
atcaccccgcaggatatggtggtgacgctgtcgcattcgggctacatcaagtcgatgccg
ttgtccgagtatcgtgcgcaaaagcgtggcgggcgcggcaagcaagcggcagccacgaag
gacgacgactggatcgacacgctgttcatcgcgaatacgcacgacacgatcctttgcttc
tcgaaccgtggccgcgtgtactggatcaaggtctatgaagtcccgcagggatcgcggaac
tcgcgcgggcgtccgatcgtcaatatgttcccgttgcaggacggcgagaagatcaacgtg
gtgctgccggtcaaggagtacacggaggatcgcttcgtgttcatggcaacgagcctgggc
acggtcaagaagacgccgctcgcggctttcagccgtccgctcaagaagggcatcatcgcc
gtgaacctcgatgatggcgacgtgctgatcggcgccgccatcaccgacggtgcacacgat
gtcatgttgttctcggacagcggcaaggcggtgcgcttcgacgaaaacgacgtgcgtccg
atggggcgcgaggctcgcggcgttcgcggcatgcagctcgaagacggtcaaacggtcatc
gcgctgctggtcgccgagaacgaacagcagtcggtgctcacggccaccgaaaacggctac
ggcaagcgcacgtcgatcaccgaatatacgcgccatggccgtggcactaagggtatgatt
gcgatccagacgagcgagcgcaacggccgggtggtcgcggcgacgctggttgagccggat
gacgagatcatgctgatcacgactggcggggtactgatccggacgcgtgtgtcggaaatt
cgcgaaatgggtcgggccacgcaaggggtgacgctgatcagcctggacgaaggcacgacg
ctctcaggcctgcaacgcatcgttgagtccgacgccgaagttgccgaggctgccgagaat
ggcgacgcccagaagagcgacgacgagacgccggaagcggatgtcacggagtaa
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