Pandoraea fibrosis: PI93_023195
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Entry
PI93_023195 CDS
T06385
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
pfib
Pandoraea fibrosis
Pathway
pfib02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
pfib00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
PI93_023195
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pfib03021
]
PI93_023195
Transcription machinery [BR:
pfib03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
PI93_023195
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
Sigma70_ECF
HTH_24
HTH_23
GerE
HTH_IclR
HTH_29
PhyR_sigma-like
HTH_28
Xre-like-HTH
HTH_20
HTH_40
HTH_Crp_2
HTH_10
HTH_38
HTH_5
HTH_17
HTH_11
TnsD
DUF6362
Motif
Other DBs
NCBI-ProteinID:
QHF15230
UniProt:
A0ABX6HWC5
LinkDB
All DBs
Position
complement(5255471..5255986)
Genome browser
AA seq
171 aa
AA seq
DB search
MPADDTLPRDTTLQGLYTDHHGWLHGWLHRKTGCSHRAADLAHDTFVRLLERDPPRMLVS
PRAFLTTVAQRVLYNDWRRAQIERAYLDALAQQPEALVPSPEARAIVLETLLEIDRCLDG
LPALVKRAFLLAQLDGLTHREIAAALGISLATVKRHLVRAGTQCFFAMGAA
NT seq
516 nt
NT seq
+upstream
nt +downstream
nt
atgcccgccgacgacacgctgccgcgcgataccacgctgcagggactctacaccgaccat
cacggctggctgcatggctggctccatcgcaagaccggctgttcgcaccgcgccgcagat
ctggcgcacgacacgttcgtgcgtctgcttgagcgcgatccgccacgcatgctggtctcg
ccgcgcgccttcctcacgaccgtggcccaacgcgttctctataacgactggcgtcgcgcg
cagatcgagcgggcgtacctcgatgcccttgcacaacagccggaagcgctcgtgccgtcg
cccgaagcgcgtgccatcgtgctcgagacgctgctggagatcgatcgctgcctcgacggt
ctgcctgccctcgtcaaacgcgccttcctgctggcgcaactcgacggactgacccatcgg
gagatcgccgccgcgctgggaatttctttagcgacagtcaagcgtcatctcgtgcgcgcc
gggacacagtgcttcttcgcgatgggcgccgcatga
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