Pandoraea fibrosis: PI93_023810
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Entry
PI93_023810 CDS
T06385
Symbol
gcvP
Name
(GenBank) aminomethyl-transferring glycine dehydrogenase
KO
K00281
glycine cleavage system P protein (glycine dehydrogenase) [EC:
1.4.4.2
]
Organism
pfib
Pandoraea fibrosis
Pathway
pfib00260
Glycine, serine and threonine metabolism
pfib00630
Glyoxylate and dicarboxylate metabolism
pfib00670
One carbon pool by folate
pfib00785
Lipoic acid metabolism
pfib01100
Metabolic pathways
pfib01110
Biosynthesis of secondary metabolites
pfib01200
Carbon metabolism
Module
pfib_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
pfib00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
PI93_023810 (gcvP)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
PI93_023810 (gcvP)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
PI93_023810 (gcvP)
00670 One carbon pool by folate
PI93_023810 (gcvP)
Enzymes [BR:
pfib01000
]
1. Oxidoreductases
1.4 Acting on the CH-NH2 group of donors
1.4.4 With a disulfide as acceptor
1.4.4.2 glycine dehydrogenase (aminomethyl-transferring)
PI93_023810 (gcvP)
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Gene cluster
GFIT
Motif
Pfam:
GDC-P
GcvP2_C
Beta_elim_lyase
Aminotran_5
FANC_SAP
Aminotran_1_2
Motif
Other DBs
NCBI-ProteinID:
QHF15332
LinkDB
All DBs
Position
complement(5395648..5398575)
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AA seq
975 aa
AA seq
DB search
MNALTDLQAPRRSLAELEQRDNFSARHIGPDTPEQQAMLAELGYASRAALIDAVVPASIR
RDSGQFATSLGQFAAPKTESQALAQLRALADQNQVFKSFIGQGYFNTFTPGVILRNVLEN
PAWYTAYTPYQPEISQGRLEALLNYQQMIIDMTGLAIANASMLDEATAAAEAMTLVKRTG
KSKSNTFFVADDVLPQTIEVVQTRAKPLGIEVQIGPVAAATEVDAFGVLVQYPGVGGDVR
DYRALADAIHAKGGMLIAAADLLSLTLLTPPGEWGADVAVGNSQRFGVPMGFGGPHAAYL
ATRDELKRSMPGRLVGVSVDSQGKPALRLALQTREQHIRREKATSNICTAQALLAIMASM
YAAYHGPQGLRVIAERVHRLTAVLAAGLTTLGAAPRNATFFDTLTVPVSGRADTVHTVAA
ARRFNLRREDDNTVGISLDETSTRDDVIALWEVVAEGLGKSAVSLDFDAIEATVSNGYPL
ALARQSQYLTHPVFNRYHSEHEMLRYLRSLSDKDLALDRTMIPLGSCTMKLNATSEMLPV
TWPEFGQIHPFAPTEQTVGYRSMIDQLEQMLVAATGYAAVSLQPNAGSQGEYAGLLIIQA
YHASRGEAHRDICLIPASAHGTNPASAQMAGMQVVVVACDANGNVDLADLQAKAEQHRDR
LAAIMMTYPSTHGVFEAGARQICEIVHANGGQVYVDGANMNAMVGLCAPGEFGGDVSHLN
LHKTFCIPHGGGGPGVGPVAVGAHLAQFLPNQRSTGYSRDADGIGAVSAAPYGSASILPI
SWMYVAMMGAQGLTAATETAILNANYLAKKLAPHYPVLYSGPGGLVAHECILDLRPLKDT
SGITVDDVAKRLMDFGFHAPTMSFPVPGTLMVEPTESESKHELDRFIEAMVAIREEIRAV
EEGRADREDNPLKHAPHTADVVTADEWPHAYARSQAAYPVKALRERKYWPPVGRADNVYG
DRNLFCACVPMSDYE
NT seq
2928 nt
NT seq
+upstream
nt +downstream
nt
atgaatgctttgactgacctgcaagccccgcgccgctcgctcgccgagcttgagcagcgc
gataacttctccgcgcgccacatcggcccggacacccccgaacaacaggcgatgctcgcc
gaactgggttatgcctcgcgcgccgcactgatcgacgcggtcgttcccgcatcgattcgc
cgcgacagcggccagttcgccacgtcgctcggccagttcgctgcgccgaaaaccgagtcg
caggcgctggcgcaattgcgcgcgctcgccgaccagaatcaggtcttcaagtcgttcatc
ggtcagggctacttcaacacgttcacgccgggcgtgatcctgcgcaacgtgctcgagaac
ccggcctggtacacggcctacaccccgtatcagccggaaatctcgcagggccgcctcgaa
gcgctgctcaactaccagcagatgatcatcgacatgacggggctggcgatcgccaacgcg
tcgatgctcgacgaagcgaccgctgccgccgaggcgatgacactggtcaagcgcacgggc
aagtcgaagtcgaacacgttcttcgtggccgacgacgtgctgccgcagaccatcgaagtg
gtgcaaacgcgtgccaagccgctgggcattgaggtccagatcggcccggtggccgccgcc
accgaagtcgatgccttcggcgtgctggtgcaataccccggtgtgggcggcgacgtgcgc
gattaccgcgcgctggccgatgcgatccatgccaagggcggcatgctgatcgctgccgcc
gatctgctgtcgctcacgctgctcacgcccccgggcgagtggggggccgacgtggccgtc
ggtaacagccagcgttttggcgtgccgatgggcttcggtggcccgcacgcggcgtatctg
gccacgcgcgacgagctcaagcgctcgatgccgggccgtctggtcggcgtgtcggtcgat
tcgcaaggcaagcctgccctgcgtctggcgctgcaaacgcgcgaacaacacattcgccgc
gagaaggcgacgtcgaatatctgtaccgcacaggcattgctcgccatcatggccagcatg
tacgccgcgtatcatggcccgcaggggctgcgtgtcatcgccgagcgtgtgcatcgtctg
acggccgtgctggccgccggtctcaccacgctgggcgccgccccgcgcaacgccacgttc
ttcgacacgctcaccgtgccggtgagcggccgtgccgataccgtccatacggtggccgcc
gcacgccgcttcaacctgcgtcgcgaagacgacaacaccgtgggcatctcgctcgacgag
acgagcacccgtgacgacgtgatcgcgctgtgggaagtggtagccgaaggcctcggcaag
agcgctgtctcgctggacttcgacgccatcgaagccacggtgtcgaacgggtatccgctg
gcgctcgcgcgtcaaagccaatacctgacgcacccggtattcaaccgttatcactccgaa
cacgaaatgctgcgttacctgcgcagcctgtcggacaaggatctggcgctcgaccgcacg
atgattccgctcggttcgtgcacgatgaagctcaacgccacctcggaaatgctgccggtg
acctggccggaattcggtcagattcacccgttcgccccgacggaacaaacggtcggctat
cgctcgatgatcgatcagctcgagcagatgctggtggcggccaccggctacgcggccgtg
tcgctgcaaccgaacgccggctcgcagggcgagtacgccggtctgctcatcatccaggcg
tatcacgcgtcgcgcggtgaagcgcatcgcgacatctgcctgatccccgcctccgcgcac
ggcacgaacccggcgtcggcgcagatggccggcatgcaggtcgtggtggttgcgtgcgac
gcgaacggcaacgtcgatctggccgatctgcaggcgaaggccgagcagcatcgtgatcgt
ctggccgcgatcatgatgacgtacccgtccacgcacggcgtgttcgaagccggtgcccgt
cagatctgcgagatcgtgcatgcgaacggcggtcaggtgtatgtcgacggcgcgaacatg
aacgcgatggtgggcctgtgcgcaccgggcgagttcggtggcgacgtctcgcatctgaac
ctgcacaagacattctgcatcccgcacggcggtggcggcccgggcgtggggccggtggcc
gtgggcgcacatctggcccagttcctgccgaatcagcgctcgacgggctattcgcgcgac
gctgacggcatcggtgctgtgtcggccgcgccatacggttcggcgtcgattctgccgatc
tcgtggatgtacgttgccatgatgggcgcgcaggggctgacggccgcgacggaaacggcc
atcctcaatgcgaactacctcgcgaagaagcttgcaccgcattacccggtgctgtactcg
ggcccgggcggcctcgtcgcgcacgagtgcattctggatctgcgtccgctcaaggacacc
agcggcatcaccgtggacgacgttgcgaagcgcctgatggacttcggtttccacgcgccg
acgatgagcttcccggtgccgggcacgctgatggtcgagccgaccgagtcggaatcgaag
cacgaactcgaccgcttcatcgaagcgatggtcgcgatccgcgaggaaatccgcgcggtg
gaagagggtcgtgccgatcgcgaggacaatccgctcaagcacgcgccgcacacggccgac
gtcgtgacggcggacgaatggccgcacgcctacgcccgcagtcaggctgcgtacccggtg
aaggcactgcgcgagcgcaagtactggccgccggtgggacgtgccgataacgtctacggc
gaccggaacctgttctgcgcctgcgtaccgatgagcgactacgagtaa
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