Paracoccus fistulariae: JHX87_02710
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Entry
JHX87_02710 CDS
T08856
Name
(GenBank) L,D-transpeptidase family protein
KO
K21470
L,D-transpeptidase YcbB
Organism
pfis
Paracoccus fistulariae
Brite
KEGG Orthology (KO) [BR:
pfis00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pfis01002
]
JHX87_02710
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pfis01011
]
JHX87_02710
Peptidases and inhibitors [BR:
pfis01002
]
Cysteine peptidases
Family C82
JHX87_02710
Peptidoglycan biosynthesis and degradation proteins [BR:
pfis01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
JHX87_02710
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
YkuD
Scaffold
PG_binding_1
Motif
Other DBs
NCBI-ProteinID:
WCR07765
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All DBs
Position
531444..533042
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AA seq
532 aa
AA seq
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MFTTKKAAAFFLAVALPFSGPAVAQQAQSLTTVAAPRLDFSAKEMALAQAAARFPDLASF
YGGNDLKPIFAGDRGDLLRQALLQVTSMAPTHGIPVSRYRPEDLAQPADDAQSEIRQAQI
LSLYLRDMTGGVLRPTSVAPTIKREVRRPRIDGLIAGFAQAPDPARFLADLAPRNPAYLA
LQDALNIDQDLTVPADLPRAPEAVWRIGMKGPGVLPLRARLDSIGFAAPSGDPGSYDAAL
SQAVARYQDAVGLPADGIAGPNTIRSLNGDLGGDRRTRAIIISLERMRWLAGEDLNARHV
WVNIPEFTAQIMDQGQEVFRTRAVVGNLGPDYETPEFSDQMEYVVVNPRWNVPRSMTVRD
YLPRLKANRNAVSHLDVVDGRGRVIPRDQIDFSRYNASNFPYRLRQKSGDDNALGLVKFI
FPNSWNIYLHDTPTKHLFGQRNRALSNGCIRISDPFDLAYALLSRQTDNPQAMFQRALDS
DKETWLALKPNVPVHLVYFTAFPDASGRIRTFNDVYGRDDLVWAALQKAGWN
NT seq
1599 nt
NT seq
+upstream
nt +downstream
nt
atgttcacgacgaaaaaggccgcggcattttttctggccgtggcgctgcccttttcgggc
cccgctgtcgcgcagcaggcacagtcgctgaccacggttgcggccccccggctggacttc
tcggccaaagagatggctctggcgcaggcggccgcgcgctttcccgatctggcgtccttt
tatggcggcaatgatctgaagccgatatttgcgggtgatcgaggcgatctgttgcggcag
gcgctgttgcaggtgacctcgatggcgccgacccatggcattccggtgtcgcgctatcgt
cccgaagatctggcgcagcccgccgatgatgcgcagtccgaaatcaggcaggcgcagatc
ctgtcgctgtatctgcgggacatgacgggcggcgtgcttcgcccgacctctgtcgcgccg
accatcaagcgagaggtccgtcgcccgcgcatcgacggcctgatcgcgggctttgcccaa
gccccggatccggcgcgctttctggcggatctggcgccgcggaacccggcctatctggcg
ttgcaggacgcgctgaacatcgatcaggacctgacggttcccgccgatctgccccgcgcg
cccgaagcggtctggcgtatcggtatgaagggtccgggcgtcctgccgctgcgtgcgcgt
ctggacagcatcggctttgccgccccctcgggcgatcccggcagctatgacgcggcgctg
tcgcaggccgtcgcgcgttatcaggatgcggtgggcctgcccgccgacgggatcgccggg
ccgaacacgatccgcagcctgaatggcgatctgggcggtgaccggcgcacgcgggccatc
atcatctcgctggagcggatgcgctggctggcgggagaggatctgaacgcgcgtcatgtc
tgggtgaatatccccgaatttaccgcgcagatcatggatcaggggcaagaggtctttcgc
acccgcgccgtagtcggcaatctgggcccggattacgaaacgcccgagttttcggatcag
atggaatatgtcgtggtcaatccacgctggaatgtgccccgctcgatgacggtgcgcgac
tatttgccacggctgaaagccaatcgaaatgcggtctcgcatctggatgtggtcgatggc
agggggcgggtcattccgcgcgatcagatcgatttctcacgctataatgcctctaatttt
ccttatcggctgcgacagaaatccggcgacgataacgcgcttgggctggtgaaattcatc
tttccgaacagctggaatatctatttgcacgatacgccgaccaaacatctgttcggtcag
cgtaatcgggcgctgtccaatggctgtatccgcatcagcgatcccttcgatctggcctat
gcgctgctttcccggcagacagataatccgcaggccatgtttcagcgcgcgctggacagt
gacaaggaaacctggctggcgctgaaaccgaacgtgcccgtgcatctggtctatttcacc
gccttccccgatgcctcgggccggatccggaccttcaacgatgtttatggccgtgacgat
cttgtttgggccgcgctgcagaaggcggggtggaattga
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