Paracoccus fistulariae: JHX87_03830
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Entry
JHX87_03830 CDS
T08856
Symbol
fdhF
Name
(GenBank) formate dehydrogenase subunit alpha
KO
K00123
formate dehydrogenase major subunit [EC:
1.17.1.9
]
Organism
pfis
Paracoccus fistulariae
Pathway
pfis00630
Glyoxylate and dicarboxylate metabolism
pfis00680
Methane metabolism
pfis01100
Metabolic pathways
pfis01120
Microbial metabolism in diverse environments
pfis01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
pfis00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
JHX87_03830 (fdhF)
09102 Energy metabolism
00680 Methane metabolism
JHX87_03830 (fdhF)
Enzymes [BR:
pfis01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.1 With NAD+ or NADP+ as acceptor
1.17.1.9 formate dehydrogenase
JHX87_03830 (fdhF)
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Gene cluster
GFIT
Motif
Pfam:
Molybdopterin
Molydop_binding
Fer2_4
NADH-G_4Fe-4S_3
Molybdop_Fe4S4
Fer4_7
Fer4
Fer4_10
Fer4_9
Fer4_Nqo3
Fer4_8
Fer4_6
Fer4_21
Fer4_2
Fer4_17
Fer4_4
TetR_C_34
Fer4_15
Motif
Other DBs
NCBI-ProteinID:
WCR07965
LinkDB
All DBs
Position
complement(760566..763472)
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AA seq
968 aa
AA seq
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MKDFIIPEFPPGDDRDMGTKIGQGAPVSLIIDGIGVTVPEGTSVMRAAAEAGVEVPKLCA
SDSLEAFGSCRLCVVQIDGRRGTPASCTTPVAQGMVVHTQSEKLRKLRRGVMELYISDHP
LDCLTCSANGDCELQDMAGAVGLRDVRYEAPEGGRLDNHFARREGGEANPLYIPKDDSNP
YFTYDPAKCIVCSRCVRACEEVQGTFALTIEGRGFDSRVAAGAVGDDFLSSDCVSCGACV
QACPTATLQEKSVIELGTPQRSVITTCAYCGVGCSFKAELNGDQLVRMVPYKHGKANRGH
SCVKGRFAYGYAQHQDRILNPMIRDSIDEPWREVDWDEALAFAASRLRRIQQDHGRQSIG
VITSSRCTNEETYLVQKLTRAVFGNNNTDTCARVCHSPTGYGLGKTYGTSAGTQDFDSVA
QTDVVVIIGANPTDGHPVFASRLKHRLRQGAKLIVIDPRRTDIVRSAHVEAAWHLPLTPG
TNVAVVTAMAHVIVTEGLYDEAFIRARCDWDEFQHYVEFVSDPRHAPEATQAMTGVPAED
LRAAARLYATGGNGAIYYGLGVTEHSQGSTTVIGIANLAMLTGNIGRPGVGVNPLRGQNN
VQGSCDMGSFPHELPGYRHVKLPEVRAIYEQAWGVQIDPEPGLRIPNMLDAAVEGTFRGL
YCQGEDILQSDPDTHHVAAGLRAMDCVIVHDLFLNETANYAHVFLPGSSFLEKDGTFTNA
ERRINRVRRVMAPRNGYEDWEITQMLANAMGGNWSYTHPSQIMDEIAATTPSFANVSYEL
LEEKGSVQWPCNGAAPEGTPLMHVDGFVAGKGHFMVTEYVATDERSGPRFPLLLTTGRIL
SHYNVGAQTRRTENTVWHPEDLLEIHPHDAEQRGIKEGDWVRLASRAGETTLRATLTDRV
AAGVVYTTFHHPTTQANVVTTDFSDWATNCPEYKVTAVQVSPSNGPSDWQERYHAQAEQA
RRILPAAG
NT seq
2907 nt
NT seq
+upstream
nt +downstream
nt
atgaaggatttcatcatccccgaatttccgcccggcgatgatcgcgacatggggaccaag
atcggccagggcgcgccggtctcgctgatcatcgacggcatcggtgtgacggtgcccgaa
ggcacatctgtgatgcgcgccgccgccgaagccggggtcgaggtgccaaagctgtgcgcc
agcgacagtcttgaggctttcgggtcctgccgtctctgcgtggtccagatcgacgggcgg
cgcggcacgcccgcatcctgcaccacgccggtggcccagggcatggtggtccacacgcaa
tccgaaaagctgcgcaagctgcgtcgcggcgtgatggagctttatatcagcgatcacccg
ctggattgcctgacctgttcggccaatggcgattgcgaattgcaggacatggccggggcc
gtgggcctgcgcgatgtccgctatgaggcgcccgagggtggccgtctggacaaccatttc
gcccggcgagagggtggcgaggccaatccgctgtacatccccaaggatgacagcaatccc
tatttcacctatgacccggcgaaatgcatcgtctgttcccgctgcgtgcgcgcctgtgaa
gaggtgcagggtaccttcgccctgaccatcgaggggcgtggctttgacagccgcgtcgct
gcgggtgcggtgggcgacgatttcctgtcctcggattgcgtcagctgcggcgcctgcgtg
caggcctgcccgacggccaccttgcaggaaaaatcggtgatcgaactgggcacgccgcag
cgatccgtgatcacgacctgcgcctattgcggggtgggctgttccttcaaggcggaactg
aacggcgatcagctggtgcgcatggtgccctataagcatggcaaggccaatcgcggccat
agctgcgtcaagggccgctttgcctatggctatgcccagcatcaggaccgcatcctgaat
ccgatgatccgcgacagcatcgacgaaccctggcgcgaggtggattgggacgaggcgctg
gcctttgccgccagccgcctgcgccggatccagcaggatcatggtcgccagtcgatcggg
gtcatcacctcaagccgctgcaccaatgaggaaacctatctggtgcagaaactgacccgc
gcggtctttggcaataacaataccgatacctgcgcacgggtctgtcattcgcccacggga
tacgggttgggcaagacctatggcacctcggccgggacgcaggatttcgacagcgtggcc
cagaccgatgtggtggtgatcatcggtgccaacccgaccgacggccacccggtctttgcc
tcgcgcctgaaacaccgtctgcgtcagggcgcgaaactgatcgtgatcgacccgcgccgc
acggatatcgtgcgctcggcccatgtcgaggccgcctggcacctgccgctgacgccgggc
accaatgtcgcggtcgtcaccgccatggcgcatgtgatcgtcaccgaggggctttatgac
gaagcctttatccgcgcccgctgtgactgggacgaatttcagcactatgtcgaattcgtc
agcgacccgcgccacgccccggaagccacgcaggccatgaccggcgtgccggccgaggat
ctgcgcgcggcggcccgtctttacgccacgggtggcaacggcgcgatctattacgggctt
ggcgtgaccgaacacagccagggctctaccaccgtgatcggcattgcgaatctggcgatg
ctgaccggaaatatcgggcgtcccggcgtgggcgtgaacccgttgcgggggcagaacaac
gtgcagggctcctgcgatatgggcagcttcccgcatgagcttcccggctatcgccatgtg
aaactgcccgaggtgcgggcgatctatgaacaggcctggggcgtccagatcgaccccgag
cccggattgcgtatccccaatatgctggatgcggcggtcgagggcacgttccgcgggctg
tattgtcagggcgaggatatcctgcaatcggatcccgacacccatcacgtcgccgccggt
ctgcgggcgatggattgcgtcatcgtccatgacctgttcctgaacgagacggcgaattac
gcccatgtctttctgcccggctccagctttctggaaaaggacgggaccttcaccaatgcc
gaacgccgcatcaatcgcgtgcgccgcgtcatggcgccgcgcaacggttacgaggattgg
gaaatcacccagatgctggccaatgcgatgggcggcaactggtcctatacccatccgtcg
cagatcatggatgaaatcgccgcgacgacgcccagctttgccaatgtcagctatgaactg
ctggaagagaagggctcggtccagtggccctgcaacggcgccgcgcccgagggcacgccg
ctgatgcatgtcgacggtttcgtggcgggcaaggggcatttcatggtcaccgaatatgtg
gccacggatgaacgcagcggcccgcgctttccgctgctgctgaccacgggccggatcctg
tcgcattacaatgtcggcgcccagacaagacggaccgaaaacaccgtctggcaccccgag
gatctgctggagatccatccccatgacgccgaacagcgcggcatcaaggaaggggattgg
gtgcggctggcctctcgcgcaggggaaacgacgctgcgggcgactttgaccgaccgcgtg
gctgccggggtggtctatacgaccttccatcacccgaccactcaggctaacgtcgtcacc
acggatttctcggattgggcgacgaactgcccggaatacaaggtgacggcagtgcaggtc
agcccctcgaacggcccatcggactggcaggaacgctatcacgcgcaggccgagcaggcg
cgccggatcctgcctgcggcgggatag
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