Paracoccus fistulariae: JHX87_09825
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Entry
JHX87_09825 CDS
T08856
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
pfis
Paracoccus fistulariae
Pathway
pfis03030
DNA replication
pfis03410
Base excision repair
pfis03420
Nucleotide excision repair
pfis03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pfis00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
JHX87_09825 (polA)
03410 Base excision repair
JHX87_09825 (polA)
03420 Nucleotide excision repair
JHX87_09825 (polA)
03440 Homologous recombination
JHX87_09825 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pfis03032
]
JHX87_09825 (polA)
03400 DNA repair and recombination proteins [BR:
pfis03400
]
JHX87_09825 (polA)
Enzymes [BR:
pfis01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
JHX87_09825 (polA)
DNA replication proteins [BR:
pfis03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
JHX87_09825 (polA)
DNA repair and recombination proteins [BR:
pfis03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
JHX87_09825 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
JHX87_09825 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
Motif
Other DBs
NCBI-ProteinID:
WCR05833
LinkDB
All DBs
Position
complement(1991592..1994381)
Genome browser
AA seq
929 aa
AA seq
DB search
MTFGKGARLHLIDGSAYIFRAYHALPPLTRKSDGLPVGAVAGFSNMLWKYISDQQGGDAP
THAAVIFDHSSKTFRNEIYSDYKANRPPPPEDLRPQFPLTRDATRAFNIACIETEGYEAD
DIIAALACQARDAGGEVTIISSDKDLMQLVGDGVTMLDPMKNKVIGPDEVAEKFGVGPDR
VVDVQALAGDSVDNVPGAPGIGIKTAAQLINEYGDLETLLARAGEIKQPKRRQTLIDHAE
QIRISKRLVELDCDTPLDFTLDSLEVKEPDATALLTFLSEMEFRTLTNRVAEKLGAEAPA
VASATPSEVAAAPEQPAIDASSYRNTVDRAALDQWIADIRERGYVAIDTETTGLDEMQAD
LVGISLATEPGKATYIPLGHVAGGDDLFGQSQRLEGQMDLDEVLAALKPVLEDPAILKIG
QNLKYDWKILRRHGITMTPIADTMLMSYALNAGTHNHGMDELAERYLGHKCIPIKDLIGS
GKSQITFAQVDLDKAGAYAAEDADVTLRLYQHFAPMLPDQRVTTVYETLERPMVPVLGQM
EMAGIRIDGDVLKRMSNAFAQKMAQLEDEIHELAGQSFNVGSPKQLGEILFDKMGLPGGK
QGKTGAYSTSADVLEDLAVDHDLPARVLDWRQISKLKSTYTDALPTYVNKDTGRVHTSYS
IAGAQTGRLASTDPNLQNIPIRSEEGRRIREAFVAASGHKLVSLDYSQIELRILAHVADI
PALKQAFRDGIDIHAMTASQMFNVPVEGMDPMIRRQAKAINFGVIYGISGFGLSRNLRIP
RAEAQAFIDTYFERFPEIRAYMDQTVADAKRDGFVRTLFGRRINTPGINQSGPAAGGARR
AAINAPIQGAAADIIRRAMIRMPDAIRNLPAQMLLQVHDELVFEVEDGAVDELIAVARDI
MENAAEPAVKLSVPLVVDAGQGVNWAEAH
NT seq
2790 nt
NT seq
+upstream
nt +downstream
nt
atgacctttggcaagggcgcgcgactgcatctgatcgacggatcggcctatatcttccgg
gcctatcatgcgctgccgccgctgacgcgcaagtcggacggacttcccgtcggggccgtg
gccgggttcagcaatatgctgtggaaatacatctcggatcagcagggcggcgatgcgccg
acccatgcggcggtgatctttgatcactcctccaagaccttccggaacgagatctattcc
gattacaaggccaaccgccccccgccgcccgaggatctgcgcccgcaattcccgctgacc
cgcgacgccacccgcgccttcaacatcgcctgcatcgagaccgaagggtacgaggccgat
gacatcatcgcggctctggcctgtcaggcgcgcgatgccgggggcgaggtgacgatcatc
agcagcgacaaggatctgatgcagcttgtcggcgatggcgtgaccatgctggacccgatg
aaaaacaaggtgatcggtcccgacgaagtggccgagaaattcggcgtcggccccgaccgg
gtggtggacgtgcaggcgctggcaggcgattccgtcgacaacgtgccgggcgcgccgggc
atcggcatcaagaccgccgcgcagctgatcaacgaatatggcgatctggaaacgctgctg
gcccgggccggggaaatcaagcagcccaagcgccgtcagaccctgatcgatcatgccgaa
cagatccgaatttccaagcgtctggtcgaactggactgcgacacgccgctggatttcacg
ctggacagtcttgaggtgaaagagcccgacgcgacggcgctgctgaccttcctgtccgag
atggagttccgcacgctgaccaaccgcgtggccgaaaagctgggggccgaggcgccggcc
gtggcctcggccacgccctccgaggttgcggccgcgccggaacagcccgccatagacgcg
tccagctatcgcaacaccgttgaccgcgcggcgctggatcagtggatcgccgatatccgc
gagcgtggctatgtcgccatcgacaccgaaaccaccgggctggatgagatgcaggccgat
ctggtcgggatatcgctggccacggaaccgggcaaggcgacctatatcccgctgggccat
gtcgccggtggcgatgatctgttcggtcagtcgcagcgccttgaggggcagatggatctg
gacgaggtgctggccgcgctgaagcctgtgctggaggatccggcgatcctgaagatcggc
cagaacctgaaatatgactggaagatcctgcgccgtcacgggatcaccatgacgcccatc
gcagatacgatgctgatgtcctatgcgctgaatgcgggcacgcataatcacgggatggat
gaactggccgagcgctatctgggtcataaatgcatcccgatcaaggatctgatcggcagc
ggcaaatcgcagatcaccttcgcgcaggtcgatctggacaaggccggtgcctatgccgcc
gaagatgccgatgtcaccttgcggctgtatcagcatttcgcgcccatgctgcccgatcag
cgcgtgacgacggtttacgaaacgcttgaacgtccgatggtgccggttctgggtcagatg
gagatggcgggcattcgcatcgatggcgacgtgctgaaacgcatgtccaacgcctttgcc
cagaagatggcgcagcttgaggacgagattcacgaattggcggggcaaagcttcaatgtc
ggcagccccaagcaattgggagagatcctgttcgacaagatgggcctgcccggtggcaag
cagggcaagaccggcgcctattccaccagcgccgatgtgctggaggatctggccgtggac
catgacctgcccgcgcgggtgctggactggcgccagatcagcaagctgaaatcgacctat
accgacgcgctgcccacctatgtcaacaaagacaccgggcgagtccataccagctattcc
atcgccggggcacagaccgggcgtctggcctcgaccgatccgaacctgcagaacatcccg
atccgcagcgaagaggggcgccgcatccgcgaggcctttgtcgcggcatcggggcacaag
ctggtcagtctggattacagccagatcgagctgcgcattctggcccatgtcgccgatatt
cctgcgctgaaacaggcgtttcgcgacgggatcgacattcacgccatgaccgccagccag
atgttcaatgtgccggtcgagggtatggatccgatgatccgccgtcaggccaaggcgatc
aatttcggggtgatctatggcatctcgggctttggtctgtcgcgcaatctgcgtatcccg
cgggccgaggcgcaggcctttatcgacacctatttcgaacgcttccccgaaatccgcgcc
tatatggatcagacggttgcggatgccaaacgcgacggctttgtgcgcacgttgttcggg
cgtcgcatcaatacccccggcatcaatcaaagcggccccgcggcaggcggcgcgcgccgc
gccgcgatcaatgcgccgattcagggcgcggcggccgatatcatccgccgcgcgatgatc
cgcatgcctgatgcgattcggaacctgcctgcgcagatgctgctgcaggtccatgacgag
ctggttttcgaggtcgaggacggcgcggtcgatgaactgatcgccgtcgcccgcgatatc
atggaaaatgcggcagagcctgcggtgaagctgtcggtgcctctggtcgtcgatgccggg
cagggggtgaactgggcagaggcgcattga
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