Paracoccus fistulariae: JHX87_10970
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Entry
JHX87_10970 CDS
T08856
Name
(GenBank) uracil-DNA glycosylase
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
pfis
Paracoccus fistulariae
Pathway
pfis03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pfis00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
JHX87_10970
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pfis03400
]
JHX87_10970
Enzymes [BR:
pfis01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
JHX87_10970
DNA repair and recombination proteins [BR:
pfis03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
JHX87_10970
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
IlvGEDA_leader
Motif
Other DBs
NCBI-ProteinID:
WCR06033
LinkDB
All DBs
Position
complement(2221432..2222256)
Genome browser
AA seq
274 aa
AA seq
DB search
MEHNPTYQGIALDAETALALLEWQVEMGADEPVLDAATDRFELPASTRPDPAPPLQMTAP
PAAPPVRRDDGPDLDAMVAQAGALAASAQTLEALAEAQQAYDGIELKKGARNFCFADGNP
KARVLILGEAPGDEEDRQGRPFVGRAGQLLDRMFDAIGLSRDAVDAEQALYIVNVLSWRP
PGNRDPSPEEIALSMPFVRRHIELAAPDVVVLMGNIPCQAALGRRGILRLRGTWTEAFGR
PALPMTHPAYLLRNPPAKREAWADLLSLSARLKG
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
atggagcataatccgacatatcagggaatcgcgctggacgccgagaccgcgcttgcgctg
ctggaatggcaggtcgagatgggcgcggatgagccggtgctggatgcggcgaccgaccgt
ttcgaactgcccgccagcacacgccccgatcccgcgccgccgctgcagatgacggcgccg
cccgccgccccgcctgtaaggcgcgatgatggccccgatctggatgccatggttgcgcag
gcgggcgcgcttgcggcctctgcccagacactggaggcgctggccgaggcgcaacaggcc
tatgacgggatcgagctgaagaagggggcgcggaacttctgtttcgcagatggcaatccc
aaggcgcgggtgctgatccttggcgaggctccgggcgatgaggaggaccgtcagggccgt
cccttcgttggccgtgcggggcaattgctggacaggatgttcgacgccatcggcctgtcg
cgcgacgcggtcgatgccgaacaggcgctgtatatcgtcaatgtgctaagctggcgtccg
cccggcaatcgtgatccaagccccgaggaaatcgcgctgagcatgccctttgtccgccgc
catatcgaactggccgcgccggatgtggtggtgctgatgggcaatatcccctgtcaggcg
gctttggggcgacgcggcatcctgcgcctgcgcggcacctggaccgaggcttttggtcgc
ccggcgctgcccatgacgcatccggcctatctgctgcgcaacccgccggccaaacgcgag
gcatgggctgatcttctgtccctgtcggcgcggctgaaaggctga
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