KEGG   Paracoccus fistulariae: JHX87_11995
Entry
JHX87_11995       CDS       T08856                                 
Symbol
tssC
Name
(GenBank) type VI secretion system contractile sheath large subunit
  KO
K11900  type VI secretion system protein ImpC
Organism
pfis  Paracoccus fistulariae
Brite
KEGG Orthology (KO) [BR:pfis00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:pfis02044]
    JHX87_11995 (tssC)
Secretion system [BR:pfis02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   JHX87_11995 (tssC)
SSDB
Motif
Pfam: VipB VipB_2
Other DBs
NCBI-ProteinID: WCR06212
LinkDB
Position
2425497..2426972
AA seq 491 aa
MSATSQKSTATPQLQESSLLDQVIGATRQTEPDQTEALLRNLTEAALSGTVSYNRNLTIT
LNKAIEAIDAKISQQLAVIMQSPEFSRLEGSWRGLHHLVTESNTGKNLKIRVLNASKREI
GRDLAKAVEFDQSRLFKSIYEDEFGTPGGEPIGALIGDYEFDNSFEDLETLQGISHVSAA
AFAPFISAAGPKMFGFEDYTELSRPRDLAKVFDSSEYAKWRGFRKSDDSRFVTLTLPRVL
ARMPYGEAGRTVDEFVYDEAIGYEGDRIPHDNYCWMNAAYVMGTNLTRAFAESGWCTAIR
GAENGGRVEGLPTHLFSTDQGDTDVKCPTEIGITDRRDSELGAMGFLPLCHYKNTDYAVF
FGAQTTHQPEKYDSPEATANAAISARLPYMMATSRFAHYLKVIGRDKIGSFMEADDCEAW
LNRWINNYVNANDDAGPEMRAQYPLREAKVTVEEIPGKPGSYNAVVWMRPWLQMEELTTA
LRMVARIPEKG
NT seq 1476 nt   +upstreamnt  +downstreamnt
atgtctgccacttcccagaaaagcaccgccacgccccagctgcaggaaagcagcctgctg
gatcaggtcatcggcgccacccgccagaccgagccggatcagaccgaggcgctgctgcgc
aacctgaccgaagccgccctgtccggcaccgtcagctataaccgcaacctgacgatcacg
ctgaacaaggcgatcgaggcgattgacgccaagatttctcagcagctggccgtgatcatg
caatcgcccgaattcagcaggctggaaggcagctggcgcgggctgcatcacctggtcacc
gaaagcaataccggcaagaacctgaagatccgcgtgctgaacgcctcgaagcgcgagatc
ggccgcgatctggccaaggcggtggaattcgaccagtcgcgcctgttcaaatccatctat
gaggatgaattcggcacccccggcggcgaacccatcggcgcgctgatcggcgattacgaa
ttcgataacagcttcgaggatctggaaaccctgcagggcatcagccacgtttcggccgca
gccttcgcgcccttcatctcggccgccggcccgaagatgttcggcttcgaggattacacc
gaactgtcgcgcccgcgcgatctggccaaggtctttgacagcagcgaatatgcgaaatgg
cgcggtttccgcaaatccgacgattcccgtttcgtgacgctgaccctgccccgcgttctg
gcccggatgccctatggcgaggccggtcgcacggtggatgaattcgtctatgacgaagcc
atcggctatgagggcgaccgcatcccgcatgacaattactgctggatgaacgcggcctat
gtgatgggcacgaacctgacccgcgccttcgcggaatcgggctggtgcacggccattcgc
ggtgctgagaatggcggccgtgtcgaaggtctgccgacgcatctcttctcgaccgatcag
ggcgataccgacgtgaaatgcccgaccgaaatcggcatcaccgaccgccgcgacagtgag
ctgggcgcgatgggctttctgccgctctgccactacaagaacaccgattacgccgtgttc
ttcggggcccagaccacccatcagccggaaaaatacgacagccccgaggcaacggccaat
gccgcgatctcggcccggctgccctatatgatggcgacctcgcgtttcgcgcattacctg
aaggtcatcggccgcgacaagatcggctctttcatggaggccgatgattgcgaggcctgg
ctgaaccgctggatcaacaattacgtcaatgccaatgacgatgcgggtccggaaatgcgg
gcgcaatatccgctgcgcgaggccaaggtcacggtcgaggaaatccccggcaagcccggc
agctataatgcggtcgtatggatgcgcccctggctgcagatggaggaactgaccaccgcg
ctgcgcatggtcgcaaggatccccgagaaaggctga

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