KEGG   Paracoccus fistulariae: JHX87_12040
Entry
JHX87_12040       CDS       T08856                                 
Symbol
tssM
Name
(GenBank) type VI secretion system membrane subunit TssM
  KO
K11891  type VI secretion system protein ImpL
Organism
pfis  Paracoccus fistulariae
Pathway
pfis03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:pfis00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    JHX87_12040 (tssM)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:pfis02044]
    JHX87_12040 (tssM)
Secretion system [BR:pfis02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   JHX87_12040 (tssM)
SSDB
Motif
Pfam: IcmF-related_N IcmF-related IcmF_C IcmF_helical AAA_25
Other DBs
NCBI-ProteinID: WCR06220
LinkDB
Position
2436239..2439709
AA seq 1156 aa
MMNFVGMWTSFKSTLDSYVSVVGRRFLVLVWVAAIAALIWIFGPRLVIGDFGPLVPARNR
IIAIIGLFVLWAIWALISWWRGRKADAALIDDIADSPEARAEAETKAEIDELRTRLRDAM
AMMRKVARRRYGYVYEFPWYLMIGAPGAGKTTLLTNSGLKLPLGDALGGEPVQGVGGTRN
CNWWFTDRAILIDTAGRYTTQDSGHERDKAGFAGFLQMLRKRRRAQPINGIVLTLSLTDL
LGQSPENRLREVRAIRQRLAEMASTLDARIPVYLVLTKADRLAGFAQFFEHLGADAREQV
WGITFPYEETAQGDVPAIFSREYHRLTERLNDQLLDRLQHEIDLDRRGRVFRFPAQIAAL
HDSLREIIEELSSGTGKVEQPLLRGVYLASATQEADDRRDMGVARSMNRSFFVDRLFSDV
ILGESGIVAGDRRVTRRRKIMQGLTYGALTAAALLLAGSWLSSYLVNSRAIEQVRLDLTR
YDDLASGIPVRDVADTDFLRVLPALDALANVPESFARQSDEAPIGVPLHKVALGLDREDA
IAQPYQRQYDRALGAYLLPRYMVALQNRLKQPDLGKGEAFETLKHYLSLAGLGPVDPDGL
LLQSEDIFATLYPGSGRAGTRERLSVHLQAMLEHGELPVMAIDDELVAKTREKLTGMDPA
QRTYEMLLSRRATQELGDWTPAGALGPTGRQIFTRASGDGLNSGISRIFTRQGYQTIVLP
QITALAEMAESEGWVLGIPETGARTQGSSQIAADAVALYWSEFTRSWNDTLSDLVIRDAD
DLRTASDLIAVIASESRPLERLAADVAQQTWLTGTDSGISLPGDGFAFDPLAAPDPYAPL
RRGLEPQGEDGGTIFTPLTPLFDNIYQQLSRASASDARTAEIFAADGALMTASQDLLAEG
QRLPAPVDQWVVGLAARVGEASVAGARASLNQIWGASGVAECRRAVEGRYPFDRSSRQDV
TVTDFARIFGPDGLFQSFFDENLAGLVDVSTNPWRWSGGLGTTGKESEALAQFQRADAIR
TAFFPPAATAPRVDYSFDLLSLDNAEVALIEIGGTSSYYGQSRTRERSFSWPGEGGRSAQ
LTLLPGSRAEALTATGPWAPFRLIDQGRDLSPVSDNEFDITFDVQNRAARMRITGGSVNN
PFNLDAMQRFSCPGSL
NT seq 3471 nt   +upstreamnt  +downstreamnt
atgatgaatttcgtcgggatgtggacctcgttcaaatccacgctggacagctatgtcagc
gtggtcggacggcggttccttgtgctggtctgggtcgcggccattgcggcgctgatctgg
atctttggcccgcgactggtgatcggcgatttcggacctctggtcccagcccgcaaccgg
atcatcgccattatcgggctgttcgtgctgtgggcgatctgggcactgatttcatggtgg
cgcgggcgcaaggccgatgccgcgctgatcgacgatatcgccgacagccccgaggcgcgc
gccgaggccgaaaccaaggccgagattgacgaattgcgcacccgcctgcgcgacgccatg
gcgatgatgcgcaaggtggcgcggcggcgctatggctatgtctacgaatttccatggtat
ctgatgatcggcgcgcccggcgcgggcaagacgacgctgctgaccaattccgggctgaaa
ctgccgcttggcgatgcattgggcggcgagccggtgcagggcgtcggcggcacgcggaac
tgcaactggtggttcaccgaccgcgcgatcctgatcgacacggccgggcgctataccacg
caggatagcggccatgaacgcgacaaggcgggctttgcgggttttctgcaaatgctgcgc
aagcggcggcgcgcacagcccatcaacggcatcgtcctgacgctgtcgctgaccgatctg
ctgggccagtcgcccgagaaccgcctgcgagaggtgcgcgcgatccgtcagcgcctggcc
gagatggcctcgacgctggatgcgcgcatcccggtctatctggtgctgaccaaggccgac
cgtctggccggctttgcgcagttctttgaacatctgggggcagatgcgcgcgaacaggtc
tggggcatcaccttcccctatgaggaaaccgcgcagggcgatgttccggccattttcagc
cgcgaatatcaccgcctgaccgaacggctgaacgatcagcttctggaccggctgcagcat
gagatcgatctggatcgccgtggccgcgtcttccgctttccggcccagatcgcggccctg
catgacagcctgcgcgaaatcatcgaagagctgtcatcgggcaccggcaaggtcgaacag
ccgctgctgcgcggggtctatctggcctcggccacgcaagaggcggatgaccgtcgcgac
atgggcgtggcccggtcgatgaatcgcagctttttcgtggatcgcctgttcagcgacgtg
atccttggcgaaagtggcatcgtcgcgggcgaccggcgggtgacccggcggcgcaagatc
atgcagggtctgacctatggcgcgctgaccgccgccgcgctgctgctggcgggatcgtgg
ctgtccagctatctggtgaacagccgtgccatcgaacaggtgcggctggatctgacgcgc
tatgacgatctggcctcggggatcccggtgcgcgatgtggccgataccgatttcctgcgc
gttctgcctgcgctggatgcgctggccaatgtccccgaaagctttgcgcggcagtcggat
gaggccccgatcggcgtgcccctgcataaggtcgcgcttggtctggatcgcgaggatgcc
atcgcccagccctatcagcggcaatatgaccgcgccttgggggcctatctgctgccgcgt
tacatggtggcgctgcagaaccggctgaaacagcccgaccttggcaagggcgaggcgttc
gagacgctgaaacattacctgtcgctggccggtctgggtccggtcgatcccgatgggctg
ctgctgcaatccgaggatatctttgccacgctttaccccggttccggccgtgcaggcacg
cgcgagcggctgtcggtgcatctgcaggccatgctggaacatggcgagttgccggtcatg
gccatcgatgacgaactggtggcaaagacccgcgaaaagctgaccggcatggatccggcc
caacgcacatatgagatgctactgtcgcgccgcgcgacgcaggaactgggcgactggaca
cctgccggggcgcttggcccgaccgggcggcagatctttacccgcgcctcgggcgatggg
ttgaacagcggcatttcgcggatctttacgcgtcagggctatcagaccatcgtgctgccg
caaatcaccgcgcttgccgagatggccgaatccgaaggctgggtgctgggcatccccgaa
accggcgcccgcacgcagggcagcagccagatcgcggcggatgcggtggcgctgtactgg
tcggaattcacccgaagctggaacgacaccctgtcggatctggtaatccgcgatgcggat
gatctgcgcaccgcctctgatctgatcgcggtgatcgcctcggaaagccgcccgctggaa
cggctggcggcggatgtggcacagcagacatggctgaccgggaccgacagcggaatctcc
ctgcccggtgacggctttgccttcgatccgctggccgcgcccgatccctatgccccgctg
cgtcgcgggctggaaccgcagggcgaggatggcgggacgatctttaccccgctgacgccg
ctcttcgacaatatctaccaacagctcagccgcgcttcggccagcgatgcccgcacggcc
gagatctttgccgcggatggcgcgctgatgaccgcctcgcaggaccttctggccgagggg
cagcgcctgcccgccccggtcgatcaatgggtcgtcgggctggcggcgcgggtgggcgaa
gcctcggtcgccggggcgcgtgcgtcgctgaaccagatctggggcgcgtcgggcgtcgcg
gaatgccggcgcgcggtcgaggggcgctatccctttgaccgaagctctcgtcaggatgtg
acggtgacggatttcgcccggatcttcggaccggatgggctgttccaaagcttctttgac
gaaaatctggcggggctggtcgatgtctcgaccaatccctggcggtggagcggcggtctg
ggcaccaccggcaaggaaagcgaggccttggcccagttccagcgcgccgatgccatccgc
acggcctttttcccaccggcggccactgcgccgcgcgtcgattactccttcgatctgctg
tcgctggacaatgccgaggtggcgctgatcgagatcgggggcaccagttcctattacggt
caaagccgcacccgagagcgcagtttcagctggcccggagagggcggtcgcagcgcacag
ctgacgctgctgccgggctcccgcgccgaggcgctgacggcgaccggtccctgggcgccc
ttccggctgatcgatcaggggcgcgatctgtcgccggtctcggataatgaattcgacatc
accttcgacgtgcagaaccgcgccgcgcggatgaggatcacgggcggatcggtcaataac
cccttcaaccttgatgccatgcagcgcttttcctgccccggttcgctatga

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