Paracoccus fistulariae: JHX87_12235
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Entry
JHX87_12235 CDS
T08856
Symbol
dnaQ
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
pfis
Paracoccus fistulariae
Pathway
pfis03030
DNA replication
pfis03430
Mismatch repair
pfis03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pfis00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
JHX87_12235 (dnaQ)
03430 Mismatch repair
JHX87_12235 (dnaQ)
03440 Homologous recombination
JHX87_12235 (dnaQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pfis03032
]
JHX87_12235 (dnaQ)
03400 DNA repair and recombination proteins [BR:
pfis03400
]
JHX87_12235 (dnaQ)
Enzymes [BR:
pfis01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
JHX87_12235 (dnaQ)
DNA replication proteins [BR:
pfis03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
JHX87_12235 (dnaQ)
DNA repair and recombination proteins [BR:
pfis03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
JHX87_12235 (dnaQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
Rv2179c-like
DNA_pol_A_exo1
DUF7706
Motif
Other DBs
NCBI-ProteinID:
WCR06259
LinkDB
All DBs
Position
complement(2478044..2478745)
Genome browser
AA seq
233 aa
AA seq
DB search
MREIVLDTETTGFDAEGADRIVEIGALELINHLPTGRTLHLYINPERSMPQEALEVHGLG
DDFLRDKPKFAEVAQQFIDFIADDAKLVIHNASFDMKFLNAELKRAGFPTIPWARALDTL
AVAREKFPGSPASLDALCRRFGVDNSSRELHGALLDSELLAEVYLELIGGRQPDFVLDQP
GQEKTDVQQTGQSGPRAQRPVPLKPRMTDEEATAHAEFVAKLGTDAIWARYSH
NT seq
702 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgagatcgttctggataccgaaaccacgggttttgatgcggaaggtgcagaccgg
atcgtggaaatcggcgctttggagctgatcaatcacctgcccaccgggcgcacattgcat
ctttacatcaatccagagcgttcgatgccgcaagaggcgttagaggtgcacggattgggc
gacgacttcctgcgggacaagccgaaatttgcagaagtagcgcagcaatttatcgatttc
attgccgatgacgccaagctagtgatccacaatgccagcttcgacatgaaattcctgaat
gccgaactgaaacgcgcgggatttcccacaattccctgggcgcgggcgctggatacgctg
gccgtcgcgcgcgagaaatttccgggctcacccgcctcgctggatgcgctctgccgacgc
ttcggggtggataactcgtctcgtgaactgcacggcgcgttgctggacagcgaattgctg
gccgaggtctatctggaactgatcggtggcaggcagcccgatttcgtgctggaccagccc
ggtcaggaaaagacggatgtccagcagaccgggcaaagcggcccgcgggcgcagcgtcct
gtgccgctgaagccacgcatgactgacgaagaagccacagcacatgcggaatttgtcgcc
aaattgggcacagatgcgatctgggcaagatattcccactga
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