Paracoccus fistulariae: JHX87_13200
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Entry
JHX87_13200 CDS
T08856
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
pfis
Paracoccus fistulariae
Pathway
pfis03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pfis00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
JHX87_13200 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pfis03019
]
JHX87_13200 (pnp)
03016 Transfer RNA biogenesis [BR:
pfis03016
]
JHX87_13200 (pnp)
Enzymes [BR:
pfis01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
JHX87_13200 (pnp)
Messenger RNA biogenesis [BR:
pfis03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
JHX87_13200 (pnp)
Transfer RNA biogenesis [BR:
pfis03016
]
Prokaryotic type
tRNA degradation factors
JHX87_13200 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
S1
RNase_PH_C
PNPase
KH_1
S1_RRP5
KH-I_KHDC4-BBP
OB_RRP5_4th
Motif
Other DBs
NCBI-ProteinID:
WCR06440
UniProt:
A0ABY7SHE8
LinkDB
All DBs
Position
2676841..2678982
Genome browser
AA seq
713 aa
AA seq
DB search
MKFDEVKKSIQWGQETLTLETGKVARQADGSVVATLGETSVMANVTFAKEPKPGQDFFPL
TVHYQEKYYAAGKIPGGFFKREARPTEKETLTARLIDRPCRPLFAPGFKNEVLVMCTVLS
HDLVNDPDIVAMIAASAALTISGVPFMGPIGAARVGFADGEYVLNPEVADMDQLRNNPEQ
RLDLVVAGTKDAVMMVESEAYELTEEEMLGAVKFGHEQMQPVIDLIIDLAEAAAKEPFDF
QSPDYSALFARVKELGEADMRAAYAILDKGERRDAIDAAKDKIVTGLTEDELADANLGSA
LKKLESSILRGDVVANGKRIDGRDTSTVRAIDSEVGVLPRTHGSALFTRGETQALVVTTL
GTGDDEQIIDALHGNFRSNFLLHYNFPPYSVGEVGRVGSPGRREIGHGKLAWRALQAVLP
AATDFPYTIRVVSEITESNGSSSMASVCGGSLSMMDAGVPLKAPVAGVAMGLILEDDGKY
AVLTDILGDEDHLGDMDFKVAGTAEGITSLQMDIKVAGITPEIMQQALAQAKDGRLHILD
EMSKAISEAGSFSAHAPRIETMQIPTDKIREVIGSGGKVIREIVETSGAKVDINDDGTIK
IASANGDAIQKAYDMIYSIVAEPEEGKIYTGKVVKLVDFGAFVNFFGKRDGLVHVSQIAN
KRLGHPSEVLKEGQEVKVKLLGFDDRGKVRLGMKMVDQDSGEEIVESKEETDA
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttgatgaagtgaagaaatccatccagtgggggcaagagaccctgacgctggaa
acgggcaaggttgcccgtcaggctgacggttcggttgtcgccactctgggcgaaaccagc
gtcatggccaacgtgaccttcgcgaaagagccgaagccgggccaggactttttcccgctg
acggttcattatcaggaaaaatactatgcggccggcaagatccccggcggcttcttcaag
cgcgaggcgcgcccgaccgagaaagagacgctgaccgcgcgtctgatcgaccgtccgtgc
cgcccgctgtttgcgccgggcttcaagaacgaagtgctggtgatgtgcaccgtgctgagc
cacgatctggtcaatgatcccgatatcgtcgcgatgatcgcggcctcggccgcgctgacc
atttcgggcgttcccttcatgggtccgatcggcgccgcgcgcgtcggctttgccgatggc
gaatatgtgttgaacccggaagtggctgacatggatcagctgcgcaacaacccggaacag
cgtctggatctggtcgtcgccggcaccaaggacgccgtgatgatggtcgaatcggaagcc
tatgagctgaccgaggaagagatgctgggcgcggtgaaattcgggcatgagcagatgcag
ccggtgatcgacctgatcatcgatctggccgaagccgccgcgaaagagccctttgacttc
cagtcgcccgattacagcgcactcttcgcccgcgtcaaagagctgggcgaggctgatatg
cgcgccgcctatgccatccttgacaagggtgagcgccgcgacgccatcgacgccgccaag
gacaagatcgtcactggtctgaccgaggatgaactggccgatgccaatctgggctcggcg
ctgaaaaagctggaatcctcgatcctgcgtggcgatgtggttgccaatggcaagcgcatc
gacggccgcgacaccagcacggtgcgcgccatcgacagcgaggttggcgtgctgccccgg
acccacggttcggcgctgttcacccgtggcgaaacgcaggcgctggtcgtgaccacgctg
ggcaccggcgatgacgaacagatcatcgacgcgctgcatggcaatttccgctcgaacttc
ctgctgcattacaacttccccccctattcggtgggcgaggttggccgcgtgggcagcccg
ggtcgtcgcgaaatcggccatggcaagctggcatggcgcgcgctgcaggccgttctgcct
gccgcgaccgacttcccctataccatccgcgtcgtctccgagatcaccgaatccaacggc
tcgtcctcgatggcctcggtttgcggtggttcgctgtcgatgatggatgcaggcgttccg
ctgaaagcgccggtcgcgggcgtggccatgggcctgatcctggaagatgacggcaaatat
gcggtcctgaccgacattctgggtgacgaagatcacctgggtgacatggacttcaaggtt
gcgggtaccgccgagggcatcaccagcctgcaaatggacatcaaggttgccggtatcacc
ccggaaatcatgcagcaggccttggcgcaggccaaggatggccgtctgcatatcctggat
gagatgtccaaggcgatcagcgaagcgggttccttctcggcccatgcgccgcggattgag
accatgcagatcccgaccgacaagatccgtgaagtgatcggctcgggcggcaaggtcatc
cgcgaaatcgtggaaacctcgggcgccaaggtcgatatcaacgacgacggcacgatcaag
atcgcctcggccaatggcgatgcgatccagaaggcctatgacatgatctattcgatcgtg
gccgagccggaagagggcaagatctataccggcaaggtcgtcaagctggtcgatttcggc
gctttcgtgaacttcttcggcaagcgcgatggcctggtccatgtcagccagatcgccaac
aagcgtctgggccatccctcggaagtcctgaaagagggccaggaggtcaaggtcaagctg
ctgggcttcgacgatcgcggcaaggtgcgccttggcatgaagatggtcgatcaggacagc
ggcgaagagatcgttgaaagcaaggaagaaaccgacgcatag
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