Paracoccus fistulariae: JHX87_13750
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Entry
JHX87_13750 CDS
T08856
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
pfis
Paracoccus fistulariae
Brite
KEGG Orthology (KO) [BR:
pfis00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pfis03016
]
JHX87_13750
Enzymes [BR:
pfis01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
JHX87_13750
Transfer RNA biogenesis [BR:
pfis03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
JHX87_13750
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNase_H_2
LytR_cpsA_psr
Motif
Other DBs
NCBI-ProteinID:
WCR06539
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All DBs
Position
2784877..2785491
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AA seq
204 aa
AA seq
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MSIHLYQNDLPEDLDLGTLVAIDTETMGLDPRRDRLCLVQMSAGDGDAHLVQIERGQTEA
PNLTKMLTDPKVTKLFHFGRFDIAALENTFGVVTSPVWCTKIASKLVRTYTDRHGLKYLL
NELVGVDVSKQQQTSDWGAADLSDAQLEYAASDVLHLHKLKEALETRLRRENRMGLAQAC
FDFLPARAHLDLLGWGDENDIFHH
NT seq
615 nt
NT seq
+upstream
nt +downstream
nt
atgagcatacatctttatcagaacgatcttcccgaggatctggatctcggcacgctggtg
gcgatcgatacggaaaccatggggctggatccgcgccgcgaccggctgtgtctggtgcag
atgtcggcaggcgatggcgatgcgcatctggtccagatcgaacgcggccagaccgaggcg
cccaatctgacaaagatgctgaccgatccgaaggtcacgaagctgttccatttcggacgc
ttcgatatcgcggcgctggagaatacctttggcgtcgtcacctcgcccgtctggtgcacc
aagatcgcctccaagctggtgcggacctataccgaccggcacgggctgaaatacctgctg
aatgagctggtcggcgtcgatgtcagcaagcagcagcagaccagcgactggggcgcggcg
gacctcagcgatgcgcagctggaatatgccgcatcggacgtgttgcacctgcacaagctg
aaagaggcgctggaaacgcgcctgcgtcgtgaaaaccgtatggggctggctcaggcctgt
ttcgatttcctgccggcccgcgcccatctggatctgctgggctggggggatgaaaacgac
atcttccatcactag
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