Paracoccus fistulariae: JHX87_15015
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Entry
JHX87_15015 CDS
T08856
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
pfis
Paracoccus fistulariae
Pathway
pfis03420
Nucleotide excision repair
pfis03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pfis00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
JHX87_15015
03430 Mismatch repair
JHX87_15015
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pfis03400
]
JHX87_15015
Enzymes [BR:
pfis01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
JHX87_15015
DNA repair and recombination proteins [BR:
pfis03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
JHX87_15015
MMR (mismatch excision repair)
Other MMR factors
JHX87_15015
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
AAA_30
UvrD_C_2
PcrA_UvrD_tudor
AAA_11
DUF3553
DEAD
Motif
Other DBs
NCBI-ProteinID:
WCR06769
LinkDB
All DBs
Position
3030533..3032914
Genome browser
AA seq
793 aa
AA seq
DB search
MDLIDDSDDVTPVPLSQRAMAGRAAPYLDGLNPAQRAAVEALDGPVLLLAGAGTGKTRAL
TSRIAHLLAQGRAHQRQILAVTFTNKAAREMKDRIGRLLGEAVEGMLWLGTFHGISVKIL
RRHAELIGNGELHLKPSFTILDTDDQIRLLKQLILAENLDEKRWPARQLAHLIDGWKNRC
LTPARLPQGEAMAFDGWGGKLYQAYQDRLLTLNAVDFGDLLMHCVTLFQAHPDVLKQWQD
RFRYILVDEYQDTNVAQYMWLRLLAQAHRNICCVGDDDQSIYGWRGAEVGNILRFEKDFP
GAQVIRLEQNYRSTPQILAAASGLISANAGRLGKTLWTEAEAGEKVRLIGHWDSEAEARW
IGEEIEAFQGGHRAALGAVGLNDIAILVRASHQMRAFEDRFMTIGLPYRVIGGPRFYERQ
EIRDAMAYFRLVVSPSDDLAFERIVNTPKRGLGDKAIKTIQNVARQNAVPLLEGARIVVG
EGHLGGKGLANLREFVVGVGRWHADALDEGISHIELAERILDESGYTAMWQNDKSPDAPG
RLDNLKELIKALEEFDNLQGFLEHVALVMDRDEGDATEEVSIMTLHGAKGLEFPVVFLPG
WEDGLFPNQRAMDENGTKGVEEERRLAYVGITRAERLATISFAGNRRLYGQWQSSMPSRF
VDELPEEHVEVLTPPGLYGGGYGAAMAFAGANAGTQMHDRAANADVYNSPGWKRMQARAT
QHKTPVPRSSVTIDASAEAIFTVGDRVSHAKFGEGQVMGMAEDTLTVQFDSGGFKNIKAA
YVQPVGRDDDVPF
NT seq
2382 nt
NT seq
+upstream
nt +downstream
nt
atggacctgattgacgattccgacgatgtgacgccggtcccgctgtcgcagcgggccatg
gccgggcgcgcggccccttatctggacgggctcaaccccgcccagcgtgcggcggtcgag
gcgctggacggccctgtgctgctgctggcaggggcgggcacgggcaagacgcgggcgctg
acttcgcgcatcgcgcatctgctggcgcagggcagggcgcatcagcgacagatcctggcc
gtgacctttaccaacaaggccgcgcgcgagatgaaagaccgaatcggccgcctgctgggc
gaggcggtcgagggcatgctttggctgggcacctttcacggtatcagcgtcaagatcctg
cgtcgccatgccgaattgatcggcaatggcgagctgcacctgaaacccagcttcaccatt
ctggacaccgacgatcagatccggttgctgaaacagctgatcctggccgaaaatctggac
gagaaacgctggcccgcacggcagttggcgcatttgatcgatggctggaagaaccgctgc
ctgacccccgccagactgccgcagggcgaggcgatggccttcgacggttggggcggcaag
ctgtatcaggcctatcaggaccggctgctgacgctgaatgcggtcgatttcggcgatctg
ctgatgcattgcgtcacgctgtttcaggcgcatcccgatgtgctgaaacaatggcaggac
cgattccgctatatcctggtggacgaatatcaggataccaatgtcgcccaatatatgtgg
ctgcggctgctggcgcaggcgcacaggaatatctgctgcgtgggtgacgacgaccagtcg
atctatggctggcgcggggccgaggtgggcaatatcctgcgctttgaaaaggattttccg
ggcgcgcaggtaatccggcttgagcagaattaccgctcgaccccgcagattttggcggcg
gcctctggcctgatttcggccaatgccggacgtctgggcaagaccctgtggaccgaggct
gaggcgggcgagaaagtccgcctgatcggccattgggacagcgaggcagaggcccgctgg
atcggcgaagagatcgaggcttttcagggcggacatcgcgcggccctgggcgcggtgggg
ctgaatgacatcgccattctggtccgtgccagccatcagatgcgtgcctttgaagatcgc
ttcatgaccatcggcctgccctatcgcgtgatcggcggcccgcgtttctacgagcggcag
gaaatccgcgatgcgatggcttatttccggctggtggtcagcccgtccgatgatctggcc
ttcgagcggatcgtgaacacgcccaagcgcggtctgggcgacaaggcgatcaagaccatc
cagaatgtcgcccgtcagaatgctgtgccgctgctggagggcgcgcggatcgtggtggga
gaggggcatctgggcggcaaggggctggccaatctgcgcgagttcgtggtcggcgtcggg
cgctggcatgccgatgcgctggatgagggcatcagccatatcgaactggccgagcggatt
ctggacgaatccggctacacggccatgtggcagaatgacaaatcgcccgacgcgccgggc
cggttggacaacctcaaggaactgatcaaggcgcttgaggaattcgacaatcttcagggc
tttctggaacatgtcgcgctggtgatggaccgggatgagggggacgcgaccgaagaggtc
agcatcatgaccctgcatggcgccaaggggctggaatttccggtcgtgttcctgcccggt
tgggaagacgggttatttccgaaccagcgcgcgatggatgagaacggcaccaagggcgtc
gaggaagagcgtcgattggcctatgtcggcattacccgggccgagcgtctggccacgatc
agctttgcgggcaaccggcggctgtatgggcagtggcaatccagcatgccctcgcgcttt
gtcgatgaactgcccgaggaacatgtcgaggttctgaccccgcccggcctctatggtggc
ggctatggtgcggcgatggcctttgccggggcgaatgcgggcacgcagatgcatgatcgc
gcggcgaatgccgatgtctataactcgcccggctggaaacggatgcaggcgcgcgcgacg
cagcacaagacgccggtgccgcgcagcagcgtgaccatcgatgccagcgccgaggccatc
tttaccgtgggcgaccgcgtcagccatgcgaaattcggcgaaggtcaggtgatgggcatg
gccgaagacacgctgaccgtgcaattcgacagcggcgggttcaagaatatcaaggccgcc
tatgtccagcccgtcgggcgtgatgacgatgtcccgttctag
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