Paracoccus fistulariae: JHX87_17735
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Entry
JHX87_17735 CDS
T08856
Name
(GenBank) DEAD/DEAH box helicase
KO
K19789
DNA repair protein RadD
Organism
pfis
Paracoccus fistulariae
Brite
KEGG Orthology (KO) [BR:
pfis00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pfis03400
]
JHX87_17735
DNA repair and recombination proteins [BR:
pfis03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factor
JHX87_17735
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ResIII
Helicase_C
DEAD
UPF0547
SWI2_SNF2
AAA_30
AAA_22
DZR
Zn_Ribbon_1
DZR_2
Lipase_GDSL_2
zf-Tbcl_FmdE
ATP-grasp_5
SLFN-g3_helicase
Zn-C2H2_12
RUBY_RBDX
Motif
Other DBs
NCBI-ProteinID:
WCR07261
LinkDB
All DBs
Position
3591229..3592917
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AA seq
562 aa
AA seq
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MRLRPRQKTFVERSVAALASRGNTLGVAPTGAGKTIMLSAVTGEMIADGAKACVLAHRDE
LTAQNRSKFQRVVPGVATSVIDATEKSWGGQVAFAMVPTLARASNLADMPRLDLLVVDEA
HHAVADSYRRIINRVREVNPDARIFGVTATPNRGDKKGLREVFDNVADQVRLGELIASGH
LVPPRTFVIDVGVQDELRSVRKTMADFDMAEVAGIMDRAPVTDEVIRHWKEKAGDRQTVV
FCSTVAHAEHVTDAFRAAGVSAALIHGDLAAETRKAILADYAAGDIRVIVNVAVLTEGWD
HPPTSCVVLLRPSSYKSTMIQMVGRGLRTVDPEEHPGIVKTDCVVLDFGTSSLIHGTLEQ
DVDLDGKTETGEAPTKTCPACEAEIPLAATECPLCGEAFPREDEGAGEGGGTAPLSGFMM
TEIDLLKRSSFAWVDLYGTDDALMATGFAAWGGIFWLDGVWYAIGGAKGERPHLLGVGER
TVCLAQADDWLNTHETDESAFKTRSWLRQPPTEKQLQYLPPECRHDFGLTRYRASALMTF
GFNKRAIRQLIDTAASPERRAA
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
atgcgcctgcgcccccgccagaagaccttcgtcgagcgcagcgtggctgcgctcgcttcc
cgcggcaacacgctgggcgtggcgcccaccggtgcgggcaagaccatcatgctctcggcg
gtcaccggcgagatgatcgcagacggcgcgaaggcctgcgtgctcgcccatcgcgacgag
ctgaccgcgcagaaccgctccaagttccagcgcgtggtgccgggcgtcgccacctcggtg
atcgacgccacggagaagtcctggggcggccaggtcgccttcgccatggtgccgacgctg
gcgcgcgcctcgaacctcgccgacatgccgcgtctcgacctgctcgtcgtagacgaggcg
caccatgccgtcgccgacagttatcgccgcatcatcaaccgggtgcgcgaggtcaatccc
gacgcccgcatcttcggggtcacggcgacgccgaaccgtggcgacaagaagggcctgcgc
gaggtcttcgacaacgtggccgaccaggtgcggctgggcgagttgatcgcctcgggccac
ctcgtcccgccgcgcaccttcgtcatcgacgtgggcgtgcaggacgagctgcgttcggtc
cgcaagaccatggcggatttcgacatggcggaggtggcgggcatcatggatcgcgccccc
gtcaccgacgaggtgatccgccactggaaggagaaggcgggcgaccggcagaccgtggtg
ttctgctccaccgtcgcccatgccgagcacgtcaccgacgccttcagggcggcgggcgtt
tccgccgcgctgatccacggggatctggcggccgagacccgaaaggcgatcctcgccgac
tacgcggcgggcgacatccgcgtcatcgtcaacgtggcggtgctgacggagggctgggac
catccgcccacttcctgcgtcgtgctgctgcgccccagctcctacaagtccaccatgatc
cagatggtcgggcgcggcctgcgcaccgtcgaccccgaggaacaccccggcatcgtcaag
accgactgcgtcgtgctggatttcggcacctcaagcctgatccacggcacgctggaacag
gatgtcgatctcgacggcaagaccgaaaccggcgaggcgccgaccaagacctgtccggcc
tgcgaggcggaaatcccgctggccgccaccgaatgcccgctctgcggcgaggctttcccg
cgcgaggatgaaggcgctggtgaaggtggtggcaccgcgccgctgtcgggcttcatgatg
acggaaatcgacctgctgaagcggtccagcttcgcgtgggtcgacctctacggcacggac
gacgcgctgatggccacgggcttcgcggcctggggcggcatcttctggctggacggggtc
tggtacgccatcggcggcgcgaagggcgaacgcccgcatctgctgggcgtgggcgagcgc
accgtctgcctcgcgcaggctgacgactggctgaacacgcacgagaccgacgagagcgcc
ttcaagacccgttcctggctccgccagccgccgaccgagaagcagctccagtacctgccg
cccgagtgccgccatgacttcggcctgacgcgctaccgcgcctccgcgctgatgaccttc
ggcttcaacaagcgcgccatccgccagctgatcgacacggcggcctctcccgaacggagg
gctgcatga
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