KEGG   Pseudomonas fitomaticsae: KJY40_00310
Entry
KJY40_00310       CDS       T08740                                 
Name
(GenBank) sigma 54-interacting transcriptional regulator
  KO
K11914  sigma-54 dependent transcriptional regulator
Organism
pfit  Pseudomonas fitomaticsae
Brite
KEGG Orthology (KO) [BR:pfit00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:pfit03000]
    KJY40_00310
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:pfit02044]
    KJY40_00310
Transcription factors [BR:pfit03000]
 Prokaryotic type
  Helix-turn-helix
   Other families
    KJY40_00310
Secretion system [BR:pfit02044]
 Type VI secretion system
  Imp/Vas secretion system related proteins
   KJY40_00310
SSDB
Motif
Pfam: Sigma54_activat AAA_lid_14 Sigma54_activ_2 HTH_8 AAA_5 HTH_30 GAF AAA_2 HTH_50 GAF_2 AAA_16 AAA_7
Other DBs
NCBI-ProteinID: UFQ00159
UniProt: A0ABY3Q275
LinkDB
Position
complement(63381..64907)
AA seq 508 aa
MFTQVPQPLLYAEALLAQFASLSRAADGVALLGDFVRGLAGLSGCELTQLYLLDATHTSL
GMNAECLDGVLQPRSAASLPADYNGEQLLQFALCQNRVVCFDDLGGSLHETSFLPASSTP
WQSLLCVPLVNQQKAVEGLLLCASRRHIDLQGFADSLGQLGSFVLGQLHLLQRLRQPVDA
AAPVVRSLPSASGYGLIGKSAAMRQTYSLISKVLHSPYTVLLRGETGTGKEVVARAIHDC
GPRRSQAFIVQNCAAFPENLLESELFGYRKGAFTGADRDRAGLFDAANGGTLLLDEIGDM
PLSLQAKLLRVLQEGEIRPLGSNDTHKIDVRIIAATHRDLSVLVSEGKFREDLYYRLAQF
PIELPALRQREGDILDLAKHFADKACTFLQRDPVRWSDAALEHLSGYTFPGNVRELKGLV
ERAVLLCEGGELLAEHFSLRLESAPAPEDHCGLNLRERLEAVERNLLLDCLRKNDGNQTL
AARELGLPRRTLLYRLGRLNINLGDFDG
NT seq 1527 nt   +upstreamnt  +downstreamnt
atgttcactcaagtgccgcagccactgctctatgccgaagccttgctggcgcagttcgcc
agcctgtcgcgcgcggcggacggtgttgcgctgctgggtgacttcgtgcgcggtctggcc
gggctgagcggttgcgaactgacgcagctgtacttgctggacgccacgcacacgtcgctg
gggatgaatgccgaatgcctcgacggcgtgctgcaaccgcgcagcgcggcgagcctgccg
gcggactacaacggcgagcaactgttgcagttcgccctgtgccagaaccgcgtggtgtgc
ttcgacgacctgggcggcagcctgcacgaaaccagttttctgccggcatcgtccacgccg
tggcagtcgctgttgtgcgtgccgctggtcaatcagcagaaggctgtcgaaggtctgttg
ctgtgcgccagccgtcgtcatatcgacctgcaaggcttcgctgattccctcggtcagctc
ggctcgttcgtgctgggtcagctgcatctgctgcaacgcctgcgccagccagtggacgcg
gccgcgccggtcgtgcgcagtctgccgagcgccagcggctacggcctgatcggcaagagc
gcggcgatgcgccagacctactcgctgatcagcaaagtcctgcacagcccgtacaccgtg
ctgttgcgtggcgagaccggcaccggcaaggaagtggtcgcgcgggcgatccacgattgc
ggcccgcgccggtcccaggcgttcatcgtgcagaactgcgcggcgttcccggaaaacctg
ctggaaagcgagctgtttggttaccgcaaaggtgcgttcaccggtgccgatcgcgaccgc
gccgggctgttcgacgcggccaacggcggcactctgttgctcgatgaaatcggtgacatg
ccgctgtcgctgcaagccaagttgctgcgtgtgttgcaggaaggcgagatccgtccgctg
ggttccaacgacacccacaagatcgacgtgcgcatcatcgccgcgacacaccgcgatctg
tcggtgctggtcagcgaaggcaaattccgcgaggacctgtactaccgcctcgcgcaattc
ccgatcgagttgccggccctgcgtcagcgcgaaggcgacatcctcgacctggccaaacac
ttcgccgacaaggcctgcacctttctgcaacgcgatccggtgcgttggtcggacgcagcg
ctggaacacctgtccggttacaccttccccggcaacgtgcgtgaactcaaaggcctggtc
gaacgggcggtgttgttgtgcgagggcggcgagttgctggccgagcatttctcgctgcgc
ctggaatcggcgccggcgccggaagaccactgcggcctcaatctgcgcgaacgactggaa
gcggtcgaacgcaatctgctgctcgattgcctgcgcaagaacgacggcaaccagacgctc
gccgcccgggaactgggcctgccgcgacgcacgctgctgtaccggctcggccgcttgaac
atcaatctgggtgatttcgatgggtag

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