KEGG   Pseudomonas fitomaticsae: KJY40_00765
Entry
KJY40_00765       CDS       T08740                                 
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
pfit  Pseudomonas fitomaticsae
Pathway
pfit00010  Glycolysis / Gluconeogenesis
pfit00020  Citrate cycle (TCA cycle)
pfit00260  Glycine, serine and threonine metabolism
pfit00280  Valine, leucine and isoleucine degradation
pfit00310  Lysine degradation
pfit00380  Tryptophan metabolism
pfit00620  Pyruvate metabolism
pfit00630  Glyoxylate and dicarboxylate metabolism
pfit00640  Propanoate metabolism
pfit00670  One carbon pool by folate
pfit00785  Lipoic acid metabolism
pfit01100  Metabolic pathways
pfit01110  Biosynthesis of secondary metabolites
pfit01120  Microbial metabolism in diverse environments
pfit01200  Carbon metabolism
pfit01210  2-Oxocarboxylic acid metabolism
pfit01240  Biosynthesis of cofactors
Module
pfit_M00009  Citrate cycle (TCA cycle, Krebs cycle)
pfit_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
pfit_M00036  Leucine degradation, leucine => acetoacetate + acetyl-CoA
pfit_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
pfit_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:pfit00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    KJY40_00765 (lpdA)
   00020 Citrate cycle (TCA cycle)
    KJY40_00765 (lpdA)
   00620 Pyruvate metabolism
    KJY40_00765 (lpdA)
   00630 Glyoxylate and dicarboxylate metabolism
    KJY40_00765 (lpdA)
   00640 Propanoate metabolism
    KJY40_00765 (lpdA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    KJY40_00765 (lpdA)
   00280 Valine, leucine and isoleucine degradation
    KJY40_00765 (lpdA)
   00310 Lysine degradation
    KJY40_00765 (lpdA)
   00380 Tryptophan metabolism
    KJY40_00765 (lpdA)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    KJY40_00765 (lpdA)
   00670 One carbon pool by folate
    KJY40_00765 (lpdA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:pfit04147]
    KJY40_00765 (lpdA)
Enzymes [BR:pfit01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     KJY40_00765 (lpdA)
Exosome [BR:pfit04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   KJY40_00765 (lpdA)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox FAD_oxidored HI0933_like Pyr_redox_3 AlaDh_PNT_C GIDA Lys_Orn_oxgnase FAD_binding_3 FAD_binding_2 Thi4 NAD_binding_8 3HCDH_N
Other DBs
NCBI-ProteinID: UFQ00245
LinkDB
Position
166488..167888
AA seq 466 aa
MSNYDVVILGGGPGGYNAAIRAGQLGLKAACVEGRATLGGTCLNVGCMPSKALLHASELY
EAALGAEFANLGIEVKPTLNLAQMMKQKDESVSGLTKGIEFLFRKNKVDWIKGWGHIDGP
GKVSVTGDQGSRIELTAKDIVIATGSEPTPLPGVEIDNKRILDSTGALSLSEVPKHLVVI
GAGVIGLELGSVWRRLGAQVTVVEYLDRICPGVDGEAGKTLQRSLSKQGISFKLSSKVTS
ATSSATGVQLSVEPAAGGNAEILEADYVLVAIGRRPYTQGLGLENVGLSTDKRGMLANKQ
HRTEAPGVWVIGDVTSGPMLAHKAEDEAMACIEQIVGKAGEVNYDLIPNVIYTRPELASV
GKTEEQLKAEGRAYKVGKFPFTANSRAKINHETEGFAKVIADERTDEVLGVHLVGPSVSE
MIGEFCVAMEFSASAEDIALTCHPHPTRSEALRQAAMNVEGMATQM
NT seq 1401 nt   +upstreamnt  +downstreamnt
atgagcaactatgacgtggtgattctgggcggtggccccggcggttataacgcagcgatc
cgcgccggccagctgggcctcaaggccgcgtgcgtcgagggccgcgctacgctgggtggc
acctgcctgaacgtcggctgcatgccgtccaaggcgcttttgcatgcgtccgagctctac
gaagcggcgctgggcgcggagttcgccaacctcggcatcgaggtcaaacccacgctcaac
ctcgcgcaaatgatgaagcagaaagacgaaagcgtgagcggcctgaccaaaggcatcgag
tttctgtttcgcaaaaacaaggtcgactggatcaagggctggggccatatcgatggcccc
ggaaaagtcagcgtgaccggcgatcagggcagccggatcgagctcaccgcgaaggacatc
gttatcgccaccggctccgagcccactcccctgcccggcgtggagatcgacaataagcgc
attctcgactcaaccggtgcactgtccctgagcgaagtacccaagcatctggtggtaatc
ggcgcaggcgtgatcgggctcgaactcggttcggtctggcgccgactcggcgcacaggta
acggtggtggaatacctcgaccgcatctgccccggtgtcgacggcgaagccggcaagacc
ctgcaacgctcactgagtaaacaaggcatcagcttcaagctgagctcgaaagtgaccagc
gccacctcctcggccactggcgtacagctcagcgtcgaacccgccgccggcggaaacgcg
gaaatcctcgaagccgattacgtattggtggccatcggtcgtcgtccgtacacccaaggc
ctgggcctggaaaacgtcggcctgagcaccgacaaacgcggcatgctcgccaacaaacag
catcgcaccgaagcgcccggcgtgtgggtgatcggcgacgtgacgtccgggccgatgctc
gcgcacaaggccgaagacgaagccatggcctgcatcgagcagatcgtcggcaaggccggc
gaggtcaattacgacctgattcccaacgtgatctacacccgcccggaactggccagcgtc
ggcaagaccgaagagcagctgaaagccgaaggccgggcgtacaaggtcggcaaattcccg
ttcaccgccaacagccgggcgaagatcaatcacgagaccgaaggttttgccaaagtcatc
gccgatgagcgcaccgacgaagtcctcggcgtgcacctggtcggcccgagcgtcagtgaa
atgatcggcgagttctgtgtggccatggaattcagcgcctcggctgaagacatcgcgctg
acctgccacccgcatccaacccgctccgaagcgttgcgtcaggcggcgatgaatgtcgag
gggatggcgacgcagatgtaa

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