Pseudomonas fitomaticsae: KJY40_01930
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Entry
KJY40_01930 CDS
T08740
Symbol
gabD
Name
(GenBank) NADP-dependent succinate-semialdehyde dehydrogenase
KO
K00135
succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:
1.2.1.16
1.2.1.79
1.2.1.20
]
Organism
pfit
Pseudomonas fitomaticsae
Pathway
pfit00250
Alanine, aspartate and glutamate metabolism
pfit00310
Lysine degradation
pfit00350
Tyrosine metabolism
pfit00650
Butanoate metabolism
pfit00760
Nicotinate and nicotinamide metabolism
pfit01100
Metabolic pathways
pfit01120
Microbial metabolism in diverse environments
Module
pfit_M00957
Lysine degradation, bacteria, L-lysine => glutarate => succinate/acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
pfit00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
KJY40_01930 (gabD)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
KJY40_01930 (gabD)
00310 Lysine degradation
KJY40_01930 (gabD)
00350 Tyrosine metabolism
KJY40_01930 (gabD)
09108 Metabolism of cofactors and vitamins
00760 Nicotinate and nicotinamide metabolism
KJY40_01930 (gabD)
Enzymes [BR:
pfit01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.1 With NAD+ or NADP+ as acceptor
1.2.1.16 succinate-semialdehyde dehydrogenase [NAD(P)+]
KJY40_01930 (gabD)
1.2.1.20 glutarate-semialdehyde dehydrogenase
KJY40_01930 (gabD)
1.2.1.79 succinate-semialdehyde dehydrogenase (NADP+)
KJY40_01930 (gabD)
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Motif
Pfam:
Aldedh
Motif
Other DBs
NCBI-ProteinID:
UFQ00469
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Position
437947..439389
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AA seq
480 aa
AA seq
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MQLKDTQLFRQQAFIDGAWVDADNGQTIKVNNPATGEILGTVPKMGAAETRRAIEAADKA
LPAWRALTAKERAGKLRRWFELMIENQDDLARLMTLEQGKPLAEAKGEIVYAASFIEWFA
EEAKRIYGDVIPGHQPDKRLIVIKQPIGVTAAITPWNFPAAMITRKAGPALAAGCTMVLK
PASQTPFSAFALAELAQRAGIPKGVFSVVSGSAGDIGSELTSNPIVRKLSFTGSTEIGRQ
LMSECAKDIKKVSLELGGNAPFIVFDDADLDKAVEGAIISKYRNNGQTCVCANRLYIQDS
VYDAFAEKLKVAVAKLKIGNGLEEGTTTGPLIDEKAVAKVQEHIADAVSKGATVLAGGKP
MEGNFFEPTILTNVPKDAAVAKEETFGPLAPLFRFKDEADVIAMSNDTEFGLASYFYARD
LGRVFRVAEALEYGMVGVNTGLISNEVAPFGGIKASGLGREGSKYGIEDYLEIKYLCLGI
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atgcagcttaaagacacccagttgttccgccagcaagccttcatcgatggcgcatgggtc
gacgcggacaacggtcagacgatcaaggtcaacaacccggccaccggcgaaattctgggc
accgtgccgaaaatgggcgctgctgaaacccgccgcgccatcgaagccgccgacaaggcg
ctgccggcctggcgtgcactgaccgccaaggagcgtgcaggcaagctgcgtcgctggttc
gaactgatgatcgagaaccaggacgacctcgctcgcctgatgaccctcgagcagggcaaa
ccactggccgaagccaagggcgaaatcgtttacgccgcttcgttcatcgagtggttcgct
gaagaagccaagcgcatttacggcgacgtgattccgggccaccagccggacaagcgcctg
atcgtgatcaaacaaccgatcggcgtgaccgccgccatcaccccgtggaacttcccggcg
gcgatgatcactcgtaaggcaggtcctgcgctggccgccggttgcaccatggtgctcaag
cctgcttcgcaaaccccgttctccgcattcgctctggccgaactggcccagcgcgccggc
atccctaaaggtgtgttcagcgtggtgtccggcagcgccggcgacatcggcagcgagctg
accagcaacccgatcgtgcgcaaactgtccttcaccggttcgaccgaaatcggtcgtcag
ctgatgtcggaatgcgccaaggacatcaagaaagtctccctggaactgggcggcaacgcg
ccgttcatcgtgttcgacgacgcggacctggataaggccgtcgaaggcgcgatcatttcc
aagtaccgcaacaacggccagacctgcgtctgcgccaaccgtctgtacattcaggattcg
gtctacgacgcgttcgccgagaagctgaaagtggccgtcgccaagctgaagatcggcaac
ggtctggaagaaggcaccaccactggcccgctgatcgacgagaaagccgtggccaaggtg
caagagcacatcgctgacgcggtgagcaaaggcgcaaccgttctggccggcggcaagccg
atggaaggcaacttcttcgagccgaccatcctgaccaacgtgccgaaagacgcagcggtg
gccaaggaagaaaccttcggtccgctggcgccgctgttccgcttcaaagacgaagccgac
gtgatcgcgatgtcgaacgacaccgagttcggtctggcctcgtacttctacgctcgcgac
ctgggccgtgtgttccgtgtagctgaagccctggaatacggcatggtcggcgtcaacacc
gggctgatctccaacgaagtcgcgccgttcggcggcatcaaggcctcgggcctgggccgt
gaaggctccaagtacggcatcgaagattacctggaaatcaaatacctctgcctgggcatc
taa
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