KEGG   Pseudomonas fitomaticsae: KJY40_04820
Entry
KJY40_04820       CDS       T08740                                 
Name
(GenBank) DEAD/DEAH box helicase family protein
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
pfit  Pseudomonas fitomaticsae
Brite
KEGG Orthology (KO) [BR:pfit00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:pfit02048]
    KJY40_04820
Enzymes [BR:pfit01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     KJY40_04820
Prokaryotic defense system [BR:pfit02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   KJY40_04820
SSDB
Motif
Pfam: ResIII EcoEI_R_C SWI2_SNF2 DEAD HSDR_N HSDR_N_2 Helicase_C AAA_11 SNF2-rel_dom SLFN-g3_helicase AAA_34 DUF2726 Mt_ATP_synt AAA_19 DUF87
Other DBs
NCBI-ProteinID: UFQ01018
LinkDB
Position
complement(1105516..1107882)
AA seq 788 aa
MDKKSLSERDICSKYIAPAVQQAGWDMHKQVREEVSFTKGRIIVRGKLHSRGEARRADFI
LYHQANLPIAVIEAKDNKHSVGSGMQQALGYAEALDVPFVFSSNGDGFLFHDRSGTGSQV
ETELTLDQFPSPTELWHRYCQWKGLDTTAQHKIEAPYYDDGSGRMPRYYQMNAINRTVEA
VARGQDRILLVMATGTGKTYTAFQIIWRLWKSKQKKRILFLADRNILVDQTKNNDFKPFG
QAMTKIAKRQIDTSYEIYLSLYQAVTGTDEEMNIYKQFSRDFFDLIVIDECHRGSASEDS
AWREILDYFSSATHVGLTATPKETKEVSSITYFGEPIYSYTLKQGIEDGFLAPYKVVRID
FDKDLQGWRPPKGMLDKNGELIEDRIYNLKDMDRTLVIEARTQLVAQKVTELLKATDPFQ
KTIVFCDDINHAERMRQALVNLNPERVAENRKYVMRITGDDQEGKAELDNFINPEERYPV
IATTSKLMTTGVDAQTCKLIVLDQHIKSMTEFKQIIGRGTRINEDYGKYWFTIMDFKKAT
ELFADPAFDGDPVVIYAPDGDDAPVPPDDPLADEDCIIAGEANDSDGLEFTGEDEGKKRI
KYVIDNVPIYVIAERVQYYGPDGRLITESLHDYTRTCVQKQFASLDDFLRRWSDSEQKKV
IIEEMAVQGVMWEALAEEVEKKQGKPLDPFDLICHVAFDQPALSRRERAEQVKKRNYFAK
YSGATRQVLEALLDKYADTGIEHIEDIKILQLDPFSQFGAPIELVKAFGGKAGYNKAIHE
LEDELYAS
NT seq 2367 nt   +upstreamnt  +downstreamnt
atggacaagaaatcactctccgagcgggacatctgcagcaagtacatcgccccagccgtt
cagcaagctggatgggatatgcacaagcaggtgcgcgaggaagtcagctttaccaaaggc
cgcatcatcgtccggggtaagctgcacagccgcggcgaagcacgccgcgcagacttcatc
ctctaccaccaggccaacttgcctatcgctgtaattgaggcgaaggacaacaagcactca
gttggctccggcatgcagcaagccctgggctatgcagaggcgctggacgtaccgttcgtg
ttctccagtaatggcgatggtttcctgtttcacgaccgcagtggcacaggcagccaagta
gaaaccgaactcaccctcgatcaattccccagccccaccgaactttggcaccgctactgc
cagtggaaggggctggatacaacagcccaacacaagatcgaagcgccctactacgacgac
ggctccgggcgcatgccgcgctattaccagatgaatgccatcaaccgcaccgtcgaagct
gtagcgcgtggccaagaccgtatcttactagtgatggccacgggcaccggtaagacctac
accgccttccaaatcatctggcggctgtggaaatcgaaacagaagaaacggatcctgttc
ctggctgaccgcaacatcctggtcgaccagaccaagaacaacgacttcaagcctttcggc
caggcgatgaccaagatcgccaaacgtcagatcgatacctcctacgagatctacctgtcg
ctctatcaggccgtcaccggcaccgatgaagagatgaacatctacaagcagttctcccgc
gacttcttcgacctgatcgtgatcgacgaatgccaccgtggcagcgcctccgaggattcc
gcctggcgtgaaatcctcgactacttttccagcgctacccatgtcggcctcaccgccaca
ccgaaggaaaccaaggaagtatccagcatcacttacttcggtgaaccgatttacagctac
accttgaagcaaggcatcgaagacggctttctcgctccctacaaagtggtgcgtatcgac
ttcgataaagacctgcaaggctggcggccacccaaaggtatgctcgataagaatggcgag
ctgatcgaagaccgcatctacaacctcaaggacatggaccgcaccctggttatagaggcg
cggacccaactggtggcgcagaaggttaccgaactcctcaaggccaccgatccgtttcag
aaaaccatcgtcttctgcgacgacatcaaccacgccgagcgcatgcgccaagcactcgtc
aacctcaaccccgagcgtgtggccgaaaaccgcaaatacgtcatgcgtatcaccggcgat
gaccaggaaggcaaggccgagctggataacttcatcaacccagaagagcgctacccggtc
attgccaccaccagcaagctgatgaccacgggcgtcgacgctcagacctgcaagctgatc
gtgctcgatcagcacatcaaatcgatgaccgagttcaaacaaatcatcggtcgcggcact
cgcatcaacgaagactacggcaagtactggttcaccatcatggacttcaaaaaggctacc
gaactgtttgccgaccctgccttcgacggcgacccggtggtgatctacgcacccgacggt
gacgacgcccccgtaccgccagacgatccgcttgccgatgaggactgcatcatcgcaggc
gaagctaacgatagtgatggcctggaattcactggcgaggatgaaggcaaaaaacgcatc
aagtacgtcatcgacaacgtcccgatttacgtcatagccgagcgtgtgcagtactacggc
ccggatggccgactgatcaccgaatcgctgcacgactacacccgcacctgcgtacaaaag
cagttcgcctcgctggatgacttcctccggcgctggagtgattccgagcaaaagaaagtc
atcatcgaggagatggccgtccagggtgtgatgtgggaagccctagccgaagaagttgaa
aagaaacagggcaaaccgctcgatccgttcgaccttatctgccacgtcgccttcgatcag
cctgccctatcacgccgcgagcgcgccgagcaggtgaaaaagcgcaactacttcgccaag
tattccggcgcaacccgccaggtgctggaggccctgttggataaatacgccgataccggc
atcgagcatatagaggacatcaaaatccttcagcttgacccttttagccagttcggtgcg
cccatcgagctggtcaaagcctttggcggcaaggctggctacaacaaggctatccacgaa
ctggaagacgaactttacgcaagctaa

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