Pseudomonas fitomaticsae: KJY40_05020
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Entry
KJY40_05020 CDS
T08740
Symbol
nusA
Name
(GenBank) transcription termination/antitermination protein NusA
KO
K02600
transcription termination/antitermination protein NusA
Organism
pfit
Pseudomonas fitomaticsae
Brite
KEGG Orthology (KO) [BR:
pfit00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pfit03021
]
KJY40_05020 (nusA)
03009 Ribosome biogenesis [BR:
pfit03009
]
KJY40_05020 (nusA)
Transcription machinery [BR:
pfit03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
KJY40_05020 (nusA)
Ribosome biogenesis [BR:
pfit03009
]
Prokaryotic type
rRNA transcription factors
KJY40_05020 (nusA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NusA_N
KH_5
HHH_5
S1
KH_NusA_C
KH_2
DUF507
RNA_pol_A_CTD
DUF2187
Motif
Other DBs
NCBI-ProteinID:
UFQ01052
LinkDB
All DBs
Position
1148779..1150260
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AA seq
493 aa
AA seq
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MSKEVLLVVESVSNEKGVPASVIFEALELALATATKKRFEDEVDLRVEINRHTGSYETFR
RWTVVEENDLDDPAIETWPSKVAETHPGAKVGDVVEEKIESIEFGRIAAQTAKQVIVQKV
REAERAQVVDAYRERLGEIISGTVKKVTRDNVIVDLGNNAEALLAREDIISRETFRVGVR
LRALLKEIRTENRGPQLILSRTAPEMLIELFRIEVPEIAEGLIEVMAASRDPGSRAKIAV
RSKDKRIDPQGACIGMRGSRVQAVSGELGGERVDIVLWDDNPAQFVINAMSPAEVAAIIV
DEDAHAMDIAVGADNLAQAIGRGGQNVRLASQLTGWTLNVMTESDIQAKQQAETGDILRN
FIDELEVDEELAQVLVDEGFTSLEEIAYVPLEEMLNIDGFDEDIVNELRARAKDRLLTKA
IATEEKLADAHPAEDLLSLEGMDKDLAMELAVRGVITREDLAEQSIDDLLDIDGIDDDRA
GKLIMAARAHWFE
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaagaagtactgctggttgttgagtcggtatccaatgaaaagggtgtaccggca
agcgtaatttttgaagcgctggagctggctctggccactgctaccaaaaagcgttttgaa
gacgaagttgatctgcgtgtggaaatcaaccgccacaccggttcttacgaaacattccgt
cgctggacggtcgtcgaagagaatgatctcgatgatccggccatcgaaacctggccgagc
aaggttgctgaaacgcacccaggcgccaaggttggcgacgtcgttgaagaaaagatcgag
tccatcgagttcggccgcatcgctgcgcagaccgccaagcaggtcatcgtgcagaaagtg
cgcgaagccgagcgcgctcaagtggttgacgcttatcgcgagcgcctgggagaaatcatc
tccggcaccgtgaagaaagtgacccgcgacaacgtgatcgtcgacctgggtaataacgct
gaagcgttgctggcccgtgaagacatcatctctcgcgaaaccttccgtgtcggcgtgcgt
ctgcgtgcgctgctcaaggaaatccgcaccgagaaccgcggccctcagctgatcctgtcg
cgtaccgcgccggaaatgctgatcgagctgttccgtatcgaagtgccggaaatcgctgaa
ggtctgatcgaagtcatggccgcatcccgtgatccgggctcgcgtgccaagatcgctgtc
cgctccaaggacaaacgcatcgacccgcaaggcgcgtgcatcggtatgcgcggttcgcgc
gtccaggccgtgtcgggcgagttgggtggcgagcgtgtcgacatcgtcctgtgggacgac
aacccggcccagttcgtgatcaatgccatgtcgccggcagaagtggcggccatcatcgtt
gacgaagatgcccatgccatggacatcgccgttggcgcagacaatctggctcaggccatc
ggtcgtggtggtcagaacgtgcgtctggcgagccagctgactggctggaccctgaacgtg
atgaccgaatcggacatccaggctaagcagcaagcggaaaccggcgacatcctgcgcaac
ttcatcgacgagctggaagtcgacgaagagctggctcaggtgctggtcgacgaaggcttc
accagcctggaagagattgcctacgtaccgttggaagaaatgctcaacatcgacggcttt
gacgaagacatcgtcaacgagcttcgcgctcgtgccaaggatcgcttgttgaccaaagcc
atcgctactgaggaaaagctggcagacgcccatccggccgaagacctgctctcgcttgag
ggtatggacaaggatttggcgatggaactggcggtgcgcggcgtaattacccgcgaagac
ctggccgagcagtctattgacgacctgctcgacatcgacggcattgacgatgatcgtgcc
ggcaagttgatcatggccgcccgagcccactggttcgagtaa
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