Pseudomonas fitomaticsae: KJY40_05035
Help
Entry
KJY40_05035 CDS
T08740
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
pfit
Pseudomonas fitomaticsae
Brite
KEGG Orthology (KO) [BR:
pfit00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pfit03016
]
KJY40_05035 (truB)
Enzymes [BR:
pfit01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
KJY40_05035 (truB)
Transfer RNA biogenesis [BR:
pfit03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
KJY40_05035 (truB)
Prokaryotic type
KJY40_05035 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
PUA_3
TruB_C
Motif
Other DBs
NCBI-ProteinID:
UFQ01055
UniProt:
A0ABY3Q4T3
LinkDB
All DBs
Position
1153370..1154287
Genome browser
AA seq
305 aa
AA seq
DB search
MAQVKRIRRNVSGIILLDKPLGFTSNAALQKVRWLLNAEKAGHTGSLDPLATGVLPLCFG
EATKFSQYLLDSDKGYETLAQLGKTTTTADAEGEVLQERPVTVGQADVEAVLPKFRGQIS
QIPPMYSALKRDGQPLYKLARAGEVVEREPRSVTIARLELLAFEGDTARLAVDCSKGTYI
RTLVEDIGEQLGCGAYVAELRRTQAGPFTLAQTVTLEELEAVHAEGGNEAVDRFLMPSDS
GLQDWPLLQFSEASAFYWLNGQPVRAPDAPKFGMVRVQDHNGRFIGIGEVSEDGRIAPRR
LIRSE
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
gtggctcaggtcaaacgtatccgtcgtaacgtcagcggcatcatcctgctcgataagccg
ctggggtttacctccaacgccgcgttgcagaaggttcgctggttgctcaacgccgagaag
gccggtcacaccggcagtctcgacccactggccaccggcgttctgccgctgtgctttggc
gaggcgaccaagttctcgcagtacctgctcgattccgacaagggttacgaaaccctggcg
caactgggcaagaccaccaccacggcggacgccgaaggcgaggttttgcaggagcgtccg
gtgaccgttggtcaggccgacgttgaagcggttctgccgaaatttcgtgggcaaatcagt
cagataccgcctatgtactccgctctcaagcgtgatggccagccgctgtacaagttggcc
cgtgcaggcgaagtagtggagcgcgaaccgcgttctgttactattgcgcgcttggaattg
ctggccttcgaaggcgatactgcgcgtcttgcggtggattgcagcaagggcacctatatt
cgcaccctggtggaggatatcggtgagcaactcggttgtggtgcgtacgtcgctgaactg
cgtcgtacccaggccgggcctttcaccctggcgcagaccgtgaccctcgaagagctggaa
gcggtacatgccgaaggcggcaacgaagcggtcgaccgcttcctgatgccatcggacagc
ggcctgcaggattggccgttgctgcagttctcggaagcgagcgcgttctactggctcaac
ggccagccggtacgtgccccggatgctccgaagttcggcatggtgcgggtacaggatcat
aacggtcgcttcatcggtatcggtgaagtgagcgaagacgggcgcatcgcgccgcgtcga
ctgattcggtcagaatga
DBGET
integrated database retrieval system
