KEGG   Pseudomonas fitomaticsae: KJY40_06115
Entry
KJY40_06115       CDS       T08740                                 
Symbol
rnc
Name
(GenBank) ribonuclease III
  KO
K03685  ribonuclease III [EC:3.1.26.3]
Organism
pfit  Pseudomonas fitomaticsae
Pathway
pfit03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:pfit00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    KJY40_06115 (rnc)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pfit03019]
    KJY40_06115 (rnc)
   03009 Ribosome biogenesis [BR:pfit03009]
    KJY40_06115 (rnc)
   03036 Chromosome and associated proteins [BR:pfit03036]
    KJY40_06115 (rnc)
Enzymes [BR:pfit01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.3  ribonuclease III
     KJY40_06115 (rnc)
Messenger RNA biogenesis [BR:pfit03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     KJY40_06115 (rnc)
Ribosome biogenesis [BR:pfit03009]
 Eukaryotic type
  90S particles
   RNase
    KJY40_06115 (rnc)
 Prokaryotic type
  rRNA processing factors
   KJY40_06115 (rnc)
Chromosome and associated proteins [BR:pfit03036]
 Eukaryotic type
  Gene silencing
   microRNA pathway
    Microprocessor complex
     KJY40_06115 (rnc)
SSDB
Motif
Pfam: Ribonucleas_3_3 Ribonuclease_3 dsrm DSRM_2
Other DBs
NCBI-ProteinID: UFQ01264
UniProt: A0ABY3Q605
LinkDB
Position
1390465..1391154
AA seq 229 aa
MSVSLSRLERQLGYTFKDQELMVLALTHRSFAGRNNERLEFLGDAILNFVAGEALFDRFP
LAREGQLSRLRARLVKGETLAVLARGFDLGDYLRLGSGELKSGGFRRESILADALEALIG
AIYLDAGMEVARERVLAWLAGEFEGLTLVDTNKDPKTRLQEFLQSRGCELPRYEVVDIQG
EPHCRTFFVECEVVLLNEKSRGQGVSRRIAEQVAAAAALIALGVENGND
NT seq 690 nt   +upstreamnt  +downstreamnt
gtgagcgtttctctaagccgtctcgagcgtcagctcggttacaccttcaaggaccaggaa
ctgatggtcctggcccttacgcaccgcagctttgccggacgcaacaacgagcgtctggaa
ttcctcggcgatgcaatcctcaactttgttgccggcgaagccttgttcgaccgtttcccg
ctggctcgcgaaggccagttgtcgcgtttgcgcgcacgactggtaaaaggtgagacgctg
gcggtgctggcccgcggtttcgatctgggcgattacctgcgtctgggttccggcgagttg
aagagtggcggattccgtcgcgagtcgattctggccgacgcccttgaagcgctgatcggt
gcgatctacctcgacgccggcatggaagtcgcccgcgagcgcgtactggcctggctggcc
ggcgagttcgaaggcctgacgctggtcgataccaacaaggatccgaagacccgcctgcag
gaattcctgcaatcgcgcggctgcgaactgccgcgctatgaagtggtggatatccagggc
gagccgcactgccgtaccttcttcgtcgagtgcgaagttgtcctattgaatgaaaaaagc
cggggtcagggtgtgagccgtcgtattgccgaacaggtagcggccgccgcagcactgatt
gccctgggtgtggagaatggcaatgactga

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