Pseudomonas fitomaticsae: KJY40_06760
Help
Entry
KJY40_06760 CDS
T08740
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
pfit
Pseudomonas fitomaticsae
Pathway
pfit03030
DNA replication
pfit03430
Mismatch repair
pfit03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pfit00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
KJY40_06760 (dnaE)
03430 Mismatch repair
KJY40_06760 (dnaE)
03440 Homologous recombination
KJY40_06760 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pfit03032
]
KJY40_06760 (dnaE)
03400 DNA repair and recombination proteins [BR:
pfit03400
]
KJY40_06760 (dnaE)
Enzymes [BR:
pfit01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
KJY40_06760 (dnaE)
DNA replication proteins [BR:
pfit03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
KJY40_06760 (dnaE)
DNA repair and recombination proteins [BR:
pfit03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
KJY40_06760 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DNA_pol_IIIA_C
tRNA_anti_2
HROB
Motif
Other DBs
NCBI-ProteinID:
UFQ01385
UniProt:
A0ABY3Q5P4
LinkDB
All DBs
Position
1533991..1537512
Genome browser
AA seq
1173 aa
AA seq
DB search
MPASFVHLRLHTEYSLVDGLVRIKPLVKALTGMGMPAVAVTDQNNMCSLVKFYKNTMGAG
IKPICGADLWLSNKDPDGPLSRLSLLVMNAQGYRNLTELISRGFIDGQRNGMVIIEREWV
AEANEGLIMLSAAKEGEIGMAMIGGNPAEAETLAREWMAVFPDRFYLEVQRTNRPNDEEQ
LHGAVALADKLGAPLVATNDVRFIKQEDFAAHETRVCIGEGRALDDPRRSKNYSDQQYLK
SAEEMAELFSDLPDAIENTVEIAKRCNIDVKLGKHFLPDYPIPDGMTIDEYFRKVSFDGL
EERLSVLLPKDTTEDYEAKRQVYVDRLNFELDIIIQMGFPGYFLIVMDFIQWAKNNGVPV
GPGRGSGAGSLVAYVQKITDLDPLEYDLLFERFLNPERVSMPDFDVDFCMDGRDRVIDYV
AEKYGRNAVSQIITFGSMAAKAVVRDVARAQGKSFGLADRLSKMIPFEVGMTLEKAYEQE
EILRDFIKVDEEAAEIWEMARKLEGVVRNVGKHAGGVVIAPTKLTDFSPIYCDEAGDGLV
TQFDKDDVEAAGLVKFDFLGLRTLTIIDWALKTINRDRAKVNEPPLDIAFIPLDDKPTYQ
LLQKAETTAVFQLESRGMKELIKKLKPDCLEDLIALVALFRPGPLQSGMVDDFINRKHGR
AELAYPHPDYQYEGLQPVLAPTYGIILYQEQVMQIAQVMAGYTLGGADMLRRAMGKKKPE
EMAKQRGGFIEGCASNNIDADLAGNIFDLVEKFAGYGFNKSHSAAYGLVSYQTAWLKAHY
PAPFMAAVLSADMHNTDKVVTLIEEVRTMKLRLDAPDVNTSEFKFTVNDEGRIVYGLGAI
KGVGEGPVEAITEARQAGPFKDLFDFCARVDLKRINKRTLDGLIRSGALDRLGPYFHDEQ
KAYQANIDRNRAVLLAAMEEAIKSAEQTARTRDSGHADLFGGLFVEEDADVYAIHRKAKE
LTLKERLKGEKDTLGLYLTGHPIDEYEGEIRRFARQRIIDLKPARDTQTVAGMIIALRVM
KNKKGDKMGFITLDDRSGRIEASLFADAFHSAQSLLQTDAMVVVEGEVSNDDFSGGLRLR
VKRVMSMEDARTNLAESLRLKLQTQDLKGDQLRWLGDLLKRHRGACPITMEYTSPDAKTL
LQFGETWRIDPADALIQALRDQFGRDNVFLQYR
NT seq
3522 nt
NT seq
+upstream
nt +downstream
nt
atgccggcttcattcgttcatctacgcctgcacactgaatactccctggtcgacgggctt
gtgcggatcaagccgctggtcaaagccctgaccggcatgggcatgccggccgttgcggtg
accgaccagaacaacatgtgttcgctggtcaaattctataaaaacaccatgggtgccggg
atcaagccgatctgcggcgccgacctgtggctgtcgaacaaggacccggatggtccgctg
agccgcctcagcctgctggtcatgaatgcccagggctatcgcaacctgaccgagctgatt
tcccgtggcttcatcgacggtcagcgcaacggcatggtcatcatcgagcgcgagtgggtc
gccgaggccaacgaaggcctgatcatgctgtccgctgcgaaagaaggcgagatcggcatg
gccatgatcggcggcaaccccgccgaggccgaaaccctggcgcgcgaatggatggcggtg
ttcccggatcgtttctatctggaagtccagcgcaccaaccgtccgaatgacgaagaacaa
ttgcacggtgccgtggccctggccgacaagctcggtgcgccgctggttgcgaccaacgat
gtgcgcttcatcaagcaggaagacttcgccgcccacgaaacccgcgtctgcatcggtgag
ggccgcgccctcgacgatccgcggcgttcgaagaactacagcgaccagcagtacctgaaa
agcgccgaggaaatggccgagctgttcagcgacctgccggatgcgatcgagaacaccgtc
gagatcgccaagcgctgcaacatcgacgtgaagctgggcaagcacttcctgcccgactat
ccaattcccgatggcatgaccatcgacgagtatttccgcaaggtctctttcgatggcctg
gaagagcgcctcagcgtgctgctgcccaaggacaccaccgaggactacgaggccaagcgt
caggtctacgtcgaccggctgaatttcgagctggatatcatcatccagatggggttcccc
ggttacttcctgatcgtgatggactttatccagtgggccaagaacaacggcgtgccggtg
ggtcctggccgggggtcgggtgccggatcgctggtggcctatgtgcagaagatcaccgac
ctcgacccgctggaatatgacctgctgttcgaacgttttctcaacccggaacgggtatcg
atgcccgacttcgacgtcgacttctgcatggatggtcgcgaccgggtgatcgattacgtg
gccgaaaaatacggccgtaacgccgtaagccagatcatcaccttcggttccatggccgcg
aaggctgtggttcgtgacgtggcgcgggcccagggcaagtcgttcggcctggcggatcgt
ctgtcgaagatgattccgttcgaagtcggcatgaccctggaaaaagcctacgagcaggaa
gaaatcctgcgcgacttcatcaaggtcgatgaagaagcggcagaaatctgggagatggcg
cgcaagctcgaaggcgtggtgcgtaacgtcggtaagcacgccggtggtgtggtgatcgca
ccgaccaaactgaccgacttctcgccgatctattgcgacgaggccggcgacggtctggtg
acccagttcgacaaggacgacgtcgaggcggccggtctggtgaagttcgacttcctcggc
ctgcggaccctgacgatcatcgactgggcgctgaaaaccatcaaccgcgaccgcgccaag
gtcaacgaaccgccgctggacatcgcgttcatcccgctggatgacaagccgacctatcag
ctgctgcaaaaagctgaaaccaccgcggtgttccagctcgaatcccgcggcatgaaagag
ctgatcaaaaagctcaagcccgactgcctcgaagacttgatcgcactggtggccctgttc
cgtccgggcccgctgcagtccggcatggtggatgacttcatcaaccgcaagcacggtcgt
gcggaacttgcgtatccgcacccggattaccagtacgaaggtttgcagccggtgctggcg
ccgacgtacggcatcatcctgtatcaggaacaggtgatgcagatcgcccaggtcatggcc
ggttacaccctcggtggtgcggacatgctgcgtcgggcgatgggcaagaagaaacccgag
gaaatggccaagcagcgcggcggtttcattgagggttgtgcgtcgaacaatatcgacgcg
gatctggccggtaacattttcgacctggtagagaaattcgccggttacggcttcaacaaa
tcccactccgccgcctacggcctggtgtcgtaccagactgcctggctgaaagcccattac
ccggcgccgttcatggccgcggtactgtcggcggacatgcacaacaccgacaaggtcgtg
accttgatcgaggaagtgcgcacgatgaaactgcgcctcgacgcgccggacgtgaacact
tcggagttcaagttcacggtgaacgacgaaggccgcatcgtgtatggcctgggcgcgatc
aaaggcgtcggcgaaggcccggtggaagcgatcaccgaggcgcgtcaggccggtccgttc
aaggacctgttcgacttctgtgcccgggtcgacctcaaacgcatcaacaagcgcacgctg
gacggtctgatccgcagcggcgcgctggatcgcctcggaccgtattttcacgacgagcaa
aaggcgtatcaggccaacatcgaccgcaaccgtgccgtgctgctggcggcgatggaagag
gcgatcaagtcggccgagcagaccgcgcgcacccgcgacagcggccacgccgacctgttt
ggcgggctgttcgtcgaagaagacgcggacgtttacgcgatccaccgcaaggcgaaagag
ctgaccctcaaggagcgactcaagggtgaaaaagacaccttgggcctgtacctgaccggt
cacccgattgacgagtacgaaggcgagatccgccgtttcgcccgccaacgcatcatcgac
ctgaaaccggcccgggatacccagaccgtggcggggatgatcattgccctgcgggtgatg
aagaacaaaaagggcgacaagatgggcttcatcaccctcgacgaccgctccgggcggatc
gaggcgtcgctgttcgccgatgcgttccactccgcgcaatcgttgttgcagaccgacgcg
atggtggtggtcgaaggcgaggtcagcaacgatgacttctccggtggtctgcggctgcgg
gtcaagcgggtgatgagcatggaagatgcgcgcaccaacctcgccgagagcctgcgcctg
aagttgcagacccaggacctgaaaggcgatcagctacgctggttgggtgatttgctcaag
cgtcatcgcggggcgtgcccgatcaccatggaatacaccagtcccgatgcgaagaccttg
ctgcagttcggcgagacctggcggatcgacccggcggatgccttgattcaagccctgcgt
gaccagttcgggcgagacaacgtcttcctccaataccgttga
DBGET
integrated database retrieval system
