Pseudomonas fitomaticsae: KJY40_06820
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Entry
KJY40_06820 CDS
T08740
Symbol
truD
Name
(GenBank) tRNA pseudouridine(13) synthase TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
pfit
Pseudomonas fitomaticsae
Brite
KEGG Orthology (KO) [BR:
pfit00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pfit03016
]
KJY40_06820 (truD)
Enzymes [BR:
pfit01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
KJY40_06820 (truD)
Transfer RNA biogenesis [BR:
pfit03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
KJY40_06820 (truD)
Prokaryotic type
KJY40_06820 (truD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
AEP-TOTE
Motif
Other DBs
NCBI-ProteinID:
UFQ01397
LinkDB
All DBs
Position
1548967..1550025
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AA seq
352 aa
AA seq
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MNELQLLGPRAYGDALGTAVLKAIAEDFQVDEVLDIPFSGDGEHLWIWVEKRGLNTEEAA
RRIAKAAGVPLRTVSYAGLKDRQALTRQWFSVQLPGKADPDLSAAENDTLKILKTTRHKR
KLQRGAHSANGFTLRLTQFNGDKAAIDERLQLIAKQGIPNYFGVQRFGHGGGNVVDARSW
AARKALPEQRNVRSRLLSTARSFLFNQVLAARVADGTWQRAQVGDLLAFTDSRSFFPAGE
AECSDPRLAILDLHPTGPQWGEGDSPAAGVVHDLEQGIAAREADLRDWLINAGMSHERRI
LRLPIGGLTWHYPEPDILQLEFVLPAGCFATVLVRELVDLVPVGQTDSPCVF
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atgaacgaactgcaactgctcggcccgcgcgcctatggcgatgccctcggcaccgcggta
ctgaaagccatcgccgaagatttccaggtcgatgaagtcctcgacattccgttcagcggt
gacggcgagcacctgtggatctgggtggaaaagcgcggcctgaatactgaagaagccgcg
cgccgtatcgccaaggcggccggtgtaccgctgcgcacggtgagttacgccgggctcaag
gatcgccaggcgctgacccgtcagtggttcagcgtgcaattgccgggcaaggccgatccg
gatctgtcggcggcggaaaacgacacgctgaaaatcctcaagaccactcgccacaagcgc
aagctgcaacgcggtgcgcattcggccaacggtttcaccctgcgcctgacccagttcaat
ggcgacaaggccgctatcgacgagcgtctgcaactgatcgccaaacaaggcatcccgaat
tacttcggcgtccagcgtttcggccatggcggcggcaacgtcgtcgatgcccgttcctgg
gccgcgcgcaaggcactgccggaacagcgcaatgtgcgctcgcgcctgttgtcgaccgcg
cgcagttttctgttcaatcaggtgctcgcagcgcgggtggccgatggcacctggcagcgt
gcccaggtcggtgatctgctggccttcaccgacagccgcagcttttttccggccggtgaa
gccgaatgcagcgacccgcgtctggcgattctcgacctgcatccgaccggcccgcagtgg
ggcgaaggtgactcgccggcggccggggttgtccatgatctggagcaggggattgccgca
cgcgaggcggatctgcgcgattggttgattaatgccggtatgagccacgaacgtcgcatc
ctgcggctgcccattggcgggttgacgtggcattatcccgagcctgacattctgcaactg
gaattcgtcctcccggccggatgcttcgccaccgtattggtgcgcgaactcgttgatctg
gtgccggtggggcagacggacagcccatgcgtattctga
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