Pseudomonas fitomaticsae: KJY40_07140
Help
Entry
KJY40_07140 CDS
T08740
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
pfit
Pseudomonas fitomaticsae
Brite
KEGG Orthology (KO) [BR:
pfit00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pfit03009
]
KJY40_07140 (rimO)
Enzymes [BR:
pfit01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
KJY40_07140 (rimO)
Ribosome biogenesis [BR:
pfit03009
]
Prokaryotic type
ribosomal protein modification factors
KJY40_07140 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
TRAM_2
UPF0004
TRAM
YajR_YAM
CLP1_P
Matrix_Paramyxo_N
Motif
Other DBs
NCBI-ProteinID:
UFQ01459
LinkDB
All DBs
Position
complement(1602543..1603880)
Genome browser
AA seq
445 aa
AA seq
DB search
MSTTPAPANPKVGFVSLGCPKALVDSERILTQLRMEGYDVVSTYQDADVVVVNTCGFIDS
AKAESLEVIGEAIKENGKVIVTGCMGVEEGNIRDVHPSVLAVTGPQQYEQVVNAVHEVVP
PKQDHNPLIDLVPPQGIKLTPRHYAYLKISEGCNHSCSFCIIPSMRGKLVSRPVGDVLDE
AQRLVKSGVKELLVISQDTSAYGVDVKYRTGFWNGAPVKTRMTELCEALSTLGVWVRLHY
VYPYPHVDELIPLMAAGKILPYLDIPFQHASPKVLKSMKRPAFEDKTLARIKNWREICPD
LIIRSTFIVGFPGETEEDFQYLLDWLTEAQLDRVGCFQYSPVEGAPANDLNLDIVPDDVK
QDRWERFMAHQQAISSARLQMRIGREIEVLVDEVDEQGAVGRCFFDAPEIDGNVFIDNGS
NLKPGDKVWCKVTDADEYDLWAEQI
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atgtccaccactcctgcgccggccaatccaaaggttggcttcgtttctctgggttgcccg
aaagcactggtcgactccgagcgcatcctgacccagctgcgcatggaaggctatgacgtg
gtgtccacctatcaggacgccgacgtggtcgtggtcaacacctgcggcttcatcgactcg
gccaaggccgaatcgctggaagtcatcggtgaagcgatcaaggaaaacggcaaggtcatc
gtgaccggctgcatgggcgtggaagaaggcaacatccgtgacgtgcacccgagcgtgctg
gccgttaccggtccgcagcaatatgagcaagtggtcaacgcggtgcacgaagtcgtgccg
ccgaaacaggatcacaacccgctgatcgacctggtgccgccgcaaggcatcaagctgacc
ccgcgccactacgcgtacctgaagatttccgaaggctgcaaccacagctgcagcttctgc
atcatcccgtcgatgcgcggcaaactggtcagccgtccggtcggcgacgtgctcgacgaa
gcccagcgcctggtcaaatccggcgtgaaggaactgctggtgatttcccaggacaccagc
gcctacggcgttgacgtcaaataccgcaccggtttctggaacggcgcgccggtgaaaacc
cgcatgaccgaactgtgcgaagcgcttagcaccctcggcgtctgggtccgtctgcactac
gtttacccgtacccgcacgtcgacgagctgatcccgctgatggccgccggcaagatcctg
ccgtacctggacatcccgttccagcacgccagcccgaaagtcctgaagtcgatgaaacgc
ccggcgttcgaagacaagaccctggcgcggatcaagaactggcgcgaaatctgcccggac
ctgatcatccgttcgaccttcatcgtcggcttccccggcgaaaccgaagaagacttccag
tacctgctggactggctgaccgaagcccagctcgaccgcgtcggctgcttccagtactcg
ccggtcgaaggcgcaccggccaatgacctgaacctcgacatcgtcccggacgacgtcaag
caggatcgttgggaacgcttcatggcgcaccagcaggccatcagctcggcgcgcctgcaa
atgcgcatcggccgtgaaatcgaagtgctggtggacgaggtcgacgagcaaggcgcagtc
ggtcgctgcttcttcgatgccccggaaatcgacggcaacgtgttcatcgacaacggcagc
aacctcaagccgggcgacaaggtctggtgcaaggtgaccgacgccgacgaatacgacctc
tgggccgaacagatctaa
DBGET
integrated database retrieval system
