Pseudomonas fitomaticsae: KJY40_07915
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Entry
KJY40_07915 CDS
T08740
Symbol
ung
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
pfit
Pseudomonas fitomaticsae
Pathway
pfit03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pfit00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
KJY40_07915 (ung)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pfit03400
]
KJY40_07915 (ung)
Enzymes [BR:
pfit01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
KJY40_07915 (ung)
DNA repair and recombination proteins [BR:
pfit03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
KJY40_07915 (ung)
Prokaryotic type
KJY40_07915 (ung)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
UFQ01607
LinkDB
All DBs
Position
1762534..1763229
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AA seq
231 aa
AA seq
DB search
MTADDRIKLEPSWKEALRAEFDQPYMAELRTFLQQERAAGKEIYPPGPMIFNALNSTPLD
KVKVVILGQDPYHGPGQAHGLCFSVQPGVPAPPSLVNIYKELKRDLNIDIPNHGYLQSWA
DQGVLMLNTTMTVERANANAHKDKGWQFFTDRIIEVVSQQQPHLVFMLWGAHAQSKQKLI
DATKHLVLTSVHPSPLSAYRGFLGCGHFSRTNKFLEQNGEAPIEWRLPSVV
NT seq
696 nt
NT seq
+upstream
nt +downstream
nt
atgactgctgacgaccgtatcaaactcgaaccgagctggaaggaggcactgcgtgccgaa
ttcgaccagccctacatggcagagttgcgcacttttctgcagcaggagcgggcggccggc
aaggaaatctatccgccgggcccgatgatcttcaacgcgttgaattcgacgccgctggac
aaggtgaaagtggtcatcctcggccaggacccgtaccacggcccgggccaggctcatggc
ttgtgcttttcggtgcaaccgggcgtgccggcaccaccgtcgctggtcaacatctataaa
gagttgaagcgcgacctgaacatcgacatccccaaccacggctacctgcagagctgggcc
gatcagggcgtgttgatgctcaacaccaccatgaccgtcgaacgcgcgaacgccaatgcg
cacaaggacaagggttggcagttctttacggaccggatcatcgaagtggtcagccagcag
caaccgcatctggtgttcatgctctggggcgctcatgcgcagagcaagcagaagctgatc
gacgccaccaagcatctggtgctgacctcggtacatccgtcgccgctgtcggcttatcgc
ggtttccttggttgcgggcacttcagccgcaccaacaagttcctggagcagaacggcgaa
gcgccgatcgagtggcgcctgccgtcggtggtctga
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