KEGG   Pseudomonas fitomaticsae: KJY40_08275
Entry
KJY40_08275       CDS       T08740                                 
Name
(GenBank) RNA polymerase sigma factor
  KO
K03088  RNA polymerase sigma-70 factor, ECF subfamily
Organism
pfit  Pseudomonas fitomaticsae
Brite
KEGG Orthology (KO) [BR:pfit00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pfit03021]
    KJY40_08275
Transcription machinery [BR:pfit03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     KJY40_08275
SSDB
Motif
Pfam: Sigma70_r2 Sigma70_r4_2 Sigma70_ECF Sigma70_r4 UBA_ARI1
Other DBs
NCBI-ProteinID: UFQ01678
UniProt: A0ABY3Q6A2
LinkDB
Position
1837853..1838464
AA seq 203 aa
MAVDDTQLLERLLAGEQKAFKELVSTYQSPMRAVAYAIVGQRHVEEVVQDAWLSVVRNIG
RFEGRSSLKTWLLTITANSAKSRYKLNRREVLLDDLPSPHGTIDDDRFSPGDGHWLVAPF
AWHQDTPEALLTEGELRECLEHTLLSLSELQSSVLLLRERQGLELEEICNLLEISLSNVR
VLLHRARLKVFATVEHFEETGEC
NT seq 612 nt   +upstreamnt  +downstreamnt
atggcggttgacgacacacaactgctcgagcggttgttggcaggcgaacagaaagccttc
aaggaactggtcagcacctatcaaagccccatgcgcgcggtggcctacgcgattgtcggc
cagcgccatgtcgaggaagtggtgcaggacgcctggctgtcggtggtacgcaatatcggc
cgtttcgaggggcgctccagcctcaagacctggctgctgaccatcactgccaactcggcc
aagagccgctacaaactcaatcgtcgcgaagtgttgctggatgatctgccgtcaccccac
ggcaccatcgacgacgatcgtttttctcccggcgacggccactggctggtcgcaccgttc
gcctggcaccaggacacgcccgaagcgctgctgacggaaggcgagctgcgtgaatgcctc
gagcacacgttgttgagcctgtcggaactgcaaagcagcgtgctgttgttgcgcgagcgc
cagggcctggagctggaggagatctgtaatcttctggagatctcgctctccaatgtccgc
gtgctgctgcatcgggcacgtttgaaggtctttgcgaccgtggagcattttgaggagacg
ggagaatgttga

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