Pseudomonas fitomaticsae: KJY40_08660
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Entry
KJY40_08660 CDS
T08740
Name
(GenBank) type I secretion system permease/ATPase
KO
K12541
ATP-binding cassette, subfamily C, bacterial LapB
Organism
pfit
Pseudomonas fitomaticsae
Pathway
pfit02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
pfit00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
KJY40_08660
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pfit02000
]
KJY40_08660
02044 Secretion system [BR:
pfit02044
]
KJY40_08660
Transporters [BR:
pfit02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC-BAC subgroup
KJY40_08660
Secretion system [BR:
pfit02044
]
Type I secretion system
Adhesin protein transporter
KJY40_08660
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
Peptidase_C39
SMC_N
AAA_33
AAA_29
AAA_22
DUF87
RTX
EMP70
Motif
Other DBs
NCBI-ProteinID:
UFQ01749
LinkDB
All DBs
Position
complement(1919278..1921437)
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AA seq
719 aa
AA seq
DB search
MTSMQSGNTGIDPRLSFDDPLLDGLLILCKLHGATVSRASLSAGLPLDRQRLSLDLLPRA
AARAGLQARLLRRELKDISPLNLPVLLLLGNGRTAVLRRFAEDGKALILPSEADGGEQWV
SREELTEHYSGQALFARPRHELEDLRSPLVPRVQAWFRDTLKLSKWLYSDAILASFLINL
LGLMVPLFVMQTYDRVVPNQATSTLWVLAIGLLIGTGFELVLRVVRAHLLDTAGKKTDVI
LSATLFERITGMAMKARPATIGGFAQSIHDFQGLREFLTAVTLTSLIDLPFVVLMLVVIG
LLGGWLVVIPLLAFPITIIFAMIIQARLRDTVQKSLSLGAERQALLIETLGGLETLKACS
AESERQHKWESTHGALTRLDSHARNLSALATNGTLFIQQFSGMATIVAGVYSIIAGNLSV
GALVASYMLGSRVLAPLGQIAGLITRYQQAQLTMKSTDALMSLPQERDGKQRPLERTQLQ
GALDANAVTFHYNGQNAPALSNVSFSVKPGERIGIIGRSGSGKSTLARLVMGFYEPEEGQ
LLLDGLDLRQLDVADLRQQIGYVAHDLPLLAGSLRDNLTLGARYISDSRMLEVAELTGVT
ELARQHPQGFDRPVGERGQLLSGGQRQAVLLARALLLDPPIMLLDEPTSAMDNSSEDVLR
QKLHGWVQGKTLLLVTHRTSMLSLVDRLLVLDNGRIVADGPKEAVIDALRKGRVGSAAV
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
atgaccagcatgcagtccggtaacaccgggatcgatccgcggctgagcttcgatgacccg
ttgctcgacggtctgttgatcctctgcaaactgcatggcgcgacggtcagtcgcgccagc
ctgagcgccggcctgcccctggacagacaacgcctgagcctggacctgctgccccgcgcc
gcagcccgggccgggttgcaggcgcgcttgctgcgccgggaactcaaagacatttcaccg
ctgaacctgccggtgctgttgctgttgggcaacgggcgcacggcggtactgcggcggttt
gccgaagacggcaaggcgctgatcctgcccagcgaagccgacggcggcgagcaatgggtc
agccgtgaagaactcaccgaacactacagcggccaggccctgttcgcccggccccggcat
gaactggaagacctgcgctcgccgctggtgccacgggtgcaggcatggtttcgcgacacc
ctgaagctgtcgaaatggctgtacagcgatgcgatcctcgccagtttcctgatcaacctg
ctgggcctgatggtgccgctgttcgtcatgcagacctacgaccgcgtggtgccgaaccag
gccacgtcaaccctgtgggtgctggccatcgggctgctgatcggcaccggttttgaactg
gtgctgcgggtggtccgcgcgcacctgctggacaccgccggcaagaagactgacgtgatc
ctttccgcgactttattcgagcgcatcaccggcatggcgatgaaggcccggccggcgacc
atcggcggattcgcccagagcattcacgactttcaggggctgcgcgaatttctcaccgcc
gtgaccctgaccagcctgatcgacctgcccttcgtggtgttgatgctggtggtgatcggc
ctgctcggtggctggctggtggtgattccgctgctggcgtttccgatcacgattatcttc
gcgatgatcattcaggcccgtctgcgcgacaccgtgcagaaaagcctgagccttggtgcc
gagcgtcaggcattgctgatcgaaaccctcggcggcctggaaaccctcaaggcctgcagc
gccgaaagcgagcgccagcacaaatgggaaagcacccacggcgccctcacccgcctcgac
agccacgcccgtaatctctcggcgctggccaccaacggcacgctgttcatccagcagttt
tcggggatggcgacgattgtggccggggtctacagcatcatcgccggcaacctcagcgtc
ggtgcactggtggccagttacatgctcggcagtcgcgtgctcgcgccgctgggacagatc
gccggactgatcacgcgctaccagcaagcgcaactgaccatgaaaagcaccgatgcgctg
atgtccctgccccaggagcgcgacggcaaacaacgtccgctggagcgcacgcaattgcaa
ggcgcgctggacgccaacgccgtgactttccactacaacggccagaatgccccggccttg
agcaacgtcagcttcagcgtcaaacccggcgagcggatcggcatcatcggccgcagcggc
tcgggcaaaagcaccctggcgcggctggtgatggggttctacgaaccggaagaaggccag
ttgctgctcgacggcctcgacctgcggcaactggatgtcgccgacctgcgccagcagatc
ggatacgtggcccacgacctgccgctgctggccggcagcctgcgtgacaacctgaccctc
ggcgcccgctacatcagcgattcgcggatgcttgaagtcgctgaactgaccggcgtcacc
gagcttgcccggcagcatccgcaaggcttcgaccggccggtgggcgagcgtgggcaactg
ctctccggtggccagcgccaagccgtgttgctggcgcgggcgctgttgctcgacccgcca
atcatgctgctcgatgaacccaccagcgccatggacaacagcagcgaagatgtcctgcgc
cagaagctgcacggctgggtgcagggcaaaaccttgctgctggtcacccaccgcacctcg
atgctgagcctggtggaccggttgctggtgctggacaacggccggatcgtcgccgacggt
ccgaaagaagcggtcatcgatgcactgcgcaagggccgggtcggctcggcagcggtctag
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