KEGG   Pseudomonas fitomaticsae: KJY40_09025
Entry
KJY40_09025       CDS       T08740                                 
Name
(GenBank) sigma-54 dependent transcriptional regulator
  KO
K10943  two-component system, response regulator FlrC
Organism
pfit  Pseudomonas fitomaticsae
Pathway
pfit02020  Two-component system
pfit02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:pfit00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    KJY40_09025
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    KJY40_09025
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02022 Two-component system [BR:pfit02022]
    KJY40_09025
   02035 Bacterial motility proteins [BR:pfit02035]
    KJY40_09025
Two-component system [BR:pfit02022]
 Other families
  FlrB-FlrC (polar flagellar synthesis)
   KJY40_09025
Bacterial motility proteins [BR:pfit02035]
 Flagellar system
  Flagellar assembly proteins
   Others
    KJY40_09025
SSDB
Motif
Pfam: Sigma54_activat Response_reg AAA_lid_14 Sigma54_activ_2 HTH_8 AAA_5 AAA_16 MCM AAA_2 AAA AAA_3 FleQ HTH_30 HTH_20 MerR AAA_19 nSTAND3 Sigma70_r4_2 HTH_24 AAA_22 HTH_28 HTH_11 HTH_23 ATPase DUF2249 AAA_7 HTH_17 HTH_Mga Myosin_head
Other DBs
NCBI-ProteinID: UFQ01818
UniProt: A0ABY3Q6R0
LinkDB
Position
2006462..2007844
AA seq 460 aa
MGIKVLLVEDDRSLREALADTLLLAGHDYHAVGSAEEALSAVEREAFSLVVSDVNMPGMD
GHQLLGLLRARQPQLPVLLMTAHGAVERAVDAMRQGAADYLVKPFEPKALLDLVARHALG
SLGASDAEGPVAVEPASAQLLDLAARVARSDSTVLISGESGTGKEVLARYIHQQSHRASQ
PFIAINCAAIPDNMLEATLFGHEKGSFTGAIAAQAGKFEQADGGTILLDEISEMPLGLQA
KLLRVLQEREVERVGARKPITLDIRVVATTNRDLAGEVAAGRFREDLYYRLSVFPLAWRP
LRERTADILPLAERLLAKHVNKMKHAMAKFSPEAQACLIGYPWPGNVRELDNAVQRALIL
QQGGLIQPQDFCLSGPALFAPLPTVAPVIREVEIEADSAGALGDDLRRREFQMIIDTLRT
ERGRRKEAAEKLGISPRTLRYKLAQMRDAGMDVEGYLFAT
NT seq 1383 nt   +upstreamnt  +downstreamnt
atgggcatcaaggttctgctggtcgaggatgaccgctcgttgcgcgaagcgctggccgat
acgctgttgctggccggtcacgactatcatgcggtgggttcggccgaagaggcgctgagc
gccgtcgagcgcgaagcgttcagtctggtggtcagcgacgtcaacatgccgggcatggac
ggtcatcaattgctcggtctgctgcgcgcgcggcagccgcaattgccggtgttgctgatg
accgcccatggcgccgtcgagcgcgcggtcgatgccatgcgtcagggcgcggcggattat
ctggtcaagccgttcgaacccaaggctctgctggatctggtagcgcgtcacgccttgggc
agcctcggcgccagcgacgccgaagggcccgtcgcagtcgaaccggccagtgctcaattg
ctggatctggcagcgcgagtcgcgcgcagcgactctaccgtgctgatttccggcgagtcc
ggtaccggcaaggaagtgctggcgcgctacatccaccagcaatcccatcgcgccagtcag
ccgttcattgcgatcaactgtgcggcgatcccggacaacatgctcgaagcgactctgttc
ggtcacgaaaagggctcgttcaccggcgccatcgcggcccaggccggcaagttcgaacag
gcggacggcggcaccattctgctcgacgaaatttccgaaatgcctctgggcctgcaagcc
aagttgctgcgggtattgcaggagcgggaagtggagcgggtcggcgcacgcaagccgatc
acccttgatatccgcgtggtcgcgaccaccaaccgggatctggccggcgaagtggcggcg
gggcggttccgtgaagacctctattatcgtctgtcggtatttcccctggcctggcgtccg
ttgcgcgagcgcaccgccgatatcctgccgctggccgagcgtctgttggccaaacacgtc
aataaaatgaagcatgcgatggcgaagttctcgcccgaggcgcaagcgtgcctgatcggt
tatccgtggccgggcaacgtgcgcgagctggataacgcggtccagcgcgcgttgattctg
cagcagggcgggttgatccagccgcaggatttctgtctctccgggcctgcgctgttcgct
ccattgccgacggttgcgccggtcattcgtgaagtcgagatcgaggcggattcggccggt
gcgctgggcgatgacctgcgtcgccgcgagttccagatgatcatcgacaccctgcgtacc
gagcgcggccgacgcaaggaagccgccgaaaagctcggcatcagcccgcgcaccctgcgg
tacaaactggcgcaaatgcgcgatgcgggcatggatgtcgaaggctacctgttcgccacc
tga

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