Pseudomonas fitomaticsae: KJY40_09425
Help
Entry
KJY40_09425 CDS
T08740
Symbol
sucD
Name
(GenBank) succinate--CoA ligase subunit alpha
KO
K01902
succinyl-CoA synthetase alpha subunit [EC:
6.2.1.5
]
Organism
pfit
Pseudomonas fitomaticsae
Pathway
pfit00020
Citrate cycle (TCA cycle)
pfit00640
Propanoate metabolism
pfit00660
C5-Branched dibasic acid metabolism
pfit00720
Other carbon fixation pathways
pfit01100
Metabolic pathways
pfit01110
Biosynthesis of secondary metabolites
pfit01120
Microbial metabolism in diverse environments
pfit01200
Carbon metabolism
Module
pfit_M00009
Citrate cycle (TCA cycle, Krebs cycle)
pfit_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
pfit00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
KJY40_09425 (sucD)
00640 Propanoate metabolism
KJY40_09425 (sucD)
00660 C5-Branched dibasic acid metabolism
KJY40_09425 (sucD)
09102 Energy metabolism
00720 Other carbon fixation pathways
KJY40_09425 (sucD)
Enzymes [BR:
pfit01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.5 succinate---CoA ligase (ADP-forming)
KJY40_09425 (sucD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CoA_binding
Ligase_CoA
Succ_CoA_lig
CoA_binding_2
Motif
Other DBs
NCBI-ProteinID:
UFQ01896
LinkDB
All DBs
Position
2087977..2088861
Genome browser
AA seq
294 aa
AA seq
DB search
MSVLINKDTKVICQGFTGAQGTFHSEQAIAYGTKMVGGVTPGKGGTTHLNLPVFNTVKEA
VEATGATASVIYVPAPFCKDSILEAAFGGIKLIVCITEGIPTLDMLDAKVKCDELGVTLI
GPNCPGVITPGECKIGIMPGHIHLPGKVGIVSRSGTLTYEAVKQTTDAGFGQSTCVGIGG
DPIPGSNFIDILKLFQEDPKTEAIVMIGEIGGSAEEEAAAYIKANVTKPVVSYIAGVTAP
PGKRMGHAGAIISGGKGTADEKFAALQDAGVKTVRSLADIGKALAELTGWEVKK
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
atgagcgtcctgatcaataaagacaccaaagtaatctgccagggcttcaccggtgcgcag
ggtactttccactccgaacaagccattgcctacggcaccaaaatggttggcggcgtgacc
ccaggcaaaggtggcaccactcacctgaacctgcctgtgttcaacaccgtgaaagaagct
gtagaagccactggcgccaccgccagcgtgatctacgttccggctcctttctgcaaggac
tcgatcctggaagcagctttcggcggcatcaagctgatcgtctgcatcaccgaaggcatt
cctaccctggacatgctggacgccaaggtcaagtgcgacgagctgggtgttaccctgatc
ggccctaactgcccaggcgtgatcaccccaggcgaatgcaagatcggcatcatgccaggt
cacattcacttgccaggcaaggtcggtatcgtttcccgttccggcaccctgacctacgaa
gctgtgaagcagactactgacgccggtttcggtcagtcgacttgcgtcggcatcggtggt
gacccgatcccgggttcgaacttcatcgacatcctgaagctgttccaggaagacccgaag
accgaagcgatcgtcatgatcggcgagatcggcggttcggctgaagaagaagcggctgct
tacatcaaagccaacgtgaccaagccggttgtttcctacatcgctggtgtgactgctcct
ccgggcaagcgcatgggccatgctggcgcaatcatctccggcggcaaaggcactgcagac
gagaaattcgctgctctgcaagacgcaggcgtgaaaaccgtgcgttcgctggcagacatc
ggcaaggccctggccgagctgactggctgggaagtgaagaagtaa
DBGET
integrated database retrieval system
