Pseudomonas fitomaticsae: KJY40_10310
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Entry
KJY40_10310 CDS
T08740
Symbol
dacB
Name
(GenBank) D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase
KO
K07259
serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:
3.4.16.4
3.4.21.-]
Organism
pfit
Pseudomonas fitomaticsae
Pathway
pfit00550
Peptidoglycan biosynthesis
pfit01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pfit00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
KJY40_10310 (dacB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pfit01002
]
KJY40_10310 (dacB)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pfit01011
]
KJY40_10310 (dacB)
Enzymes [BR:
pfit01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
KJY40_10310 (dacB)
Peptidases and inhibitors [BR:
pfit01002
]
Serine peptidases
Family S13: D-Ala-D-Ala peptidase C family
KJY40_10310 (dacB)
Peptidoglycan biosynthesis and degradation proteins [BR:
pfit01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
KJY40_10310 (dacB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S13
Beta-lactamase2
DUF2997
Motif
Other DBs
NCBI-ProteinID:
UFQ02061
LinkDB
All DBs
Position
complement(2272230..2273690)
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AA seq
486 aa
AA seq
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MIKSLRPLLLAGLLLPLALPVSAATINTALTPNVEKALKASKLQPTALSLVMVPLDGPGT
PTVYNADVSVNPASTMKLVTTYAALEMLGPNHQWKTEFYTDGDLNGGILNGNLYLKGGGD
PKLNMEKLWLLMRDLRANGVTQVTGDLVLDRSFFVQPQLPEFNDDGNDENKPFLVKPDSL
LVNLKALRFVARNDNGRVLISVEPPIASINIENTVKALNSKQCTGGVRYNPVPQADGSVT
VTVAGQLGEGCSSQTYLSLLDHATYTAGAVRAIWKELGGSIQGKDRLAPTPSSAKVLARA
FSPDLAEIIRDINKYSNNTMAQQLFLSLGQKFRNDADGDDAKAAQRVVRQWLAKKGITAP
HLVMENGSGLSRSERVSAREMASMLQAAWHSPYAAEYISSLPIAGTDGTMRKRLKTTAMR
GEAHVKTGTLNTVRAIAGFSRDVNGNTWAVVAILNDKAPFGASSVLDQVLLDLYKQPRTP
QTASVL
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atgatcaaatcgttgcgtcctctgcttctggccggtcttcttctgccgctggccctgccc
gtctccgctgccaccatcaacaccgccctgacccccaacgtcgaaaaagccctcaaggcc
agcaagctgcagcccacggccctgtcgctggtgatggtgccgctggacggcccgggcacg
ccgaccgtgtacaacgccgacgtgtcggtcaatccggcctcgaccatgaagctggtcacc
acttacgcggcgctggaaatgctcggtcccaaccatcagtggaaaaccgagttctacacc
gacggtgacctgaacggcgggatcctcaacggcaacctctacctcaagggtggtggcgat
ccgaagctgaacatggaaaaactctggctgctgatgcgcgacctgcgtgccaacggcgtg
actcaggtcaccggtgatctggtgctcgatcgcagcttcttcgtgcagccgcaactgccg
gaattcaacgatgacggcaacgacgagaacaagccgttcctggtcaagccggattcgctg
ctggtcaacctcaaggccctgcgtttcgtggcccgcaatgacaatggccgggttttgatc
tcggtcgaaccgccgattgccagcatcaacatcgaaaacaccgtcaaagcgctcaactcc
aaacaatgcaccggtggcgtgcgctacaacccggtgccgcaggccgatggcagcgtgacc
gtgaccgtggccggccagttgggcgaaggctgcagctcgcagacttacctgtcgctgctc
gaccacgcgacctacaccgccggcgccgtgcgggcgatctggaaggaactgggcggcagc
atccagggcaaggatcgtctggccccgaccccgagcagcgccaaggtgctggcccgggcg
ttctcgccggatctggcggaaatcatccgcgacatcaacaagtacagtaacaacaccatg
gctcagcagctgttcctgagcctgggccagaaattccgcaacgacgccgacggcgatgac
gccaaggccgcgcaacgcgtggtccgtcagtggctggcgaagaaaggcatcaccgcgccg
cacctggtgatggagaacggctccggcctgtcgcgttcggagcgggtcagtgcccgggaa
atggccagcatgctgcaagcggcctggcacagcccgtatgctgccgagtacatcagctcg
ctgccgattgccggcaccgacggcaccatgcgcaaacgcctgaagaccaccgcgatgcgc
ggcgaagcccacgtcaagaccggcaccctgaacaccgtgcgggcgattgccggcttcagc
cgcgacgtcaacggcaatacctgggcggtggtggcgatcctcaacgataaagccccgttc
ggcgcgtcgtcggtgctggatcaggtgttgctggatctctacaaacagccgcggacgccg
cagaccgcttcggttctgtaa
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