Pseudomonas fitomaticsae: KJY40_12360
Help
Entry
KJY40_12360 CDS
T08740
Name
(GenBank) LysR family transcriptional regulator
KO
K16135
LysR family transcriptional regulator, transcriptional activator for dmlA
Organism
pfit
Pseudomonas fitomaticsae
Brite
KEGG Orthology (KO) [BR:
pfit00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pfit03000
]
KJY40_12360
Transcription factors [BR:
pfit03000
]
Prokaryotic type
Helix-turn-helix
LysR family
KJY40_12360
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_30
DUF2089
HTH_8
HTH_AsnC-type
HTH_24
P22_Cro
Motif
Other DBs
NCBI-ProteinID:
UFQ02440
LinkDB
All DBs
Position
complement(2718195..2719109)
Genome browser
AA seq
304 aa
AA seq
DB search
MSQTLDLSFFHLLANKGSLAATARELGVTPPAVSKRLSALEARLGVRLVNRTTRSMSLTA
EGELYFSHAARILTQIDEVEQLIGASRATPKGLIRVNASLGFGRRYIGPALAAFFAQYPE
VEIQLEISDHPLDLTTHGFDLGIRFGTLPDAAFHARKIASNRRLLCASPLYLEKHGVPQK
LSDLPQHNCIFLRQNETPYGVWSFTDGGRTQNVKVRGALGCNDGEVALNWALEGYGILLR
AEWDIARYVRSGRLRLVLEDQTPTRADVYAVYPQQLHLSARVRSLIDFLVDRFRHIDNLD
DPGD
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atgagtcaaaccctcgatctgtcgttttttcatcttctcgccaacaagggcagcctggcc
gctacggctcgcgagcttggtgtgacgcctccggcagtcagtaaacgcctgagtgcgctg
gaggctcgtctcggcgtgcggttggtcaatcgcactacacgctcaatgagtcttacggca
gaaggcgaactgtatttttcccacgcggcgaggatcctcacgcagatcgacgaggtcgag
cagttgatcggcgccagccgcgcaacccccaagggtctgatccgggtcaatgcctcgctg
ggctttggtcgtcgttacatcggtccggccctggcagcgttttttgcccaatacccggag
gtggaaatccagttggaaatcagcgaccacccactggatctgacgacccacggatttgat
ctggggattcgtttcggcaccctgcctgacgcggcatttcatgcccggaagattgcctca
aaccgccgtttgctctgtgcctcgccgctgtatctggagaaacacggtgtgccacaaaaa
ctgtcggacttgccgcaacacaactgcatattcctgcggcagaacgaaacgccctatggc
gtctggagcttcactgacggcggacgtacgcagaacgtcaaagtgcgtggtgccctggga
tgcaacgatggtgaagtggccctgaactgggccctggaaggctatggcattctgctgcgc
gccgaatgggacatagcccgctacgtgcgcagcggccgtttgcgcctggtactggaagac
cagaccccgacccgcgccgatgtgtacgcggtgtacccgcagcagctgcatctctcggca
cgggttcgcagcctgatcgactttctggtggaccgcttcaggcacatcgacaatctggat
gatccgggcgactaa
DBGET
integrated database retrieval system
