Pseudomonas fitomaticsae: KJY40_12775
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Entry
KJY40_12775 CDS
T08740
Name
(GenBank) lysine decarboxylase
KO
K01584
arginine decarboxylase [EC:
4.1.1.19
]
Organism
pfit
Pseudomonas fitomaticsae
Pathway
pfit00330
Arginine and proline metabolism
pfit01100
Metabolic pathways
pfit01110
Biosynthesis of secondary metabolites
Module
pfit_M00133
Polyamine biosynthesis, arginine => agmatine => putrescine => spermidine
Brite
KEGG Orthology (KO) [BR:
pfit00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
KJY40_12775
Enzymes [BR:
pfit01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.19 arginine decarboxylase
KJY40_12775
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Gene cluster
GFIT
Motif
Pfam:
OKR_DC_1
OKR_DC_1_C
OKR_DC_1_N
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
UFQ02522
UniProt:
A0ABY3Q8L7
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Position
2801203..2803458
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AA seq
751 aa
AA seq
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MYKDLKFPVLIVHRDIKTDTVAGDRIRGIARELELEGFSIVSATDYTEGRLVASTHHGLA
CMLIAAEDASTNSHLLQNMAELIGLARVRAPDLPIFALGEQVTLENAPADAMAELNQLRG
ILYLFEDTVPFLARQVARAARKYLDGLLPPFFKALVQHTADSNYSWHTPGHGGGVAYHKS
PVGQAFHQFFGENTLRSDLSVSVPELGSLLDHTGPLAEAEARAARNFGADHTFFVINGTS
TANKIVWHSMVGRDDLVLVDRNCHKSVLHAIIMTGAIPLYLCPERNELGIIGPIPLSEFS
RESIQAKIDASPLTKGREPKVKLAVITNSTYDGLCYNAELIKQSLGNSVEVLHFDEAWYA
YAAFHEFFAGRYGMATSRSEDSPLVFTTHSTHKLLAAFSQASMIHVQDGGARQLDRDRFN
EAFMMHISTSPQYSIIASLDVASAMMEGPAGRSLLQETFDEALSFRRALANLRQHIAADD
WWFSIWQPPGVEGIDRVQTEDWLLQPDADWHGFGEVSDDYVLLDPIKVTLVMPGLTAGGA
LSDKGIPAAVVSRFLWERGLVVEKTGLYSFLVLFSMGITKGKWSTLLTELLEFKRSYDAN
VSLDTCLKCVAQEDPVRYRGMGLRDLCDQLHACYRSNATAKHLKRMYTVLPEIAMKPAHA
YDQLVRGEVEAVPIDELEGRVAAVMLVPYPPGIPLIMPGERFTESTRSIIEYLRFARTFD
ATFPGFVVDVHGLQHEDEGNGRHYTVDCVKE
NT seq
2256 nt
NT seq
+upstream
nt +downstream
nt
atgtacaaagatctgaagttcccggtattgatcgtccaccgcgacatcaagaccgacacg
gttgccggtgaccgcatccgcggaatcgcccgagagctggagctcgaaggtttcagtatc
gtttcggccacggactacaccgaaggccggctggtggcgtcgacccaccacggtctggcg
tgcatgctgatcgccgccgaagacgccagcaccaactcccacctgttgcagaacatggcc
gaactgatcggtctggcccgggtgcgggcgccggatctgccgatctttgccctcggcgag
caagtcactctggaaaacgccccggccgatgccatggccgagctcaaccagttgcgcggc
attctctatctgttcgaagacaccgtgccgtttttggcccggcaagtggcgcgggcggcg
cgcaagtatctggacggcctgttgccgccgtttttcaaggcgctggtgcagcacaccgcc
gactccaattattcctggcacacacccggtcacggcggcggtgtggcttatcacaagagc
ccggtggggcaggcgtttcaccagtttttcggggaaaacaccctgcgctcggatttgtcg
gtgtcggtgccggagctggggtcgttgctcgaccacaccgggccgctggccgaggcggaa
gcacgagccgcgcgcaatttcggcgccgatcacacctttttcgtgatcaatggcacctcg
accgccaacaagatcgtctggcactcgatggtcgggcgcgatgatctggtgctggtggat
cgcaactgccacaagtcggtgttgcacgcgatcatcatgaccggcgcgatcccgctgtat
ctgtgcccggagcgcaatgagctggggatcatcggcccgattccgctcagtgaattcagt
cgcgaatcgatccaggccaagatcgacgccagcccgctgaccaagggccgcgagccgaaa
gtcaaactggcggtgatcaccaactccacctacgacggcctctgctacaacgccgagctg
atcaagcagagcctgggcaacagcgtcgaagtcctgcatttcgatgaggcctggtacgcc
tatgcggcgtttcacgaattctttgccggccgttacggtatggccacctcgcgcagcgag
gacagtccgctggtgttcactacccattccacccacaaactgctggcggcgttcagccag
gcgtcaatgattcatgtgcaggacggcggcgcccggcagcttgatcgagaccggttcaac
gaagcgttcatgatgcacatctcgacgtcgccgcagtacagcatcatcgcctcgctggac
gtggcgtcggcgatgatggaagggccggccgggcgctcgctgttgcaggaaaccttcgac
gaagccctgagctttcgccgggccctggccaatctgcgccagcacatcgccgctgacgac
tggtggttctcgatctggcagccgccgggtgtcgagggtatcgaccgggtgcagaccgag
gactggctgctgcaacccgatgcggactggcatggtttcggcgaggtcagcgacgactac
gtactgctcgacccgatcaaggtcacgctggtcatgccgggcctgaccgctggcggcgct
ttaagcgacaagggtattccggcggccgtggtcagccgcttcctctgggagcgcgggctg
gtggtggagaaaaccggcctgtattcatttctggtgctgttctccatgggcatcaccaag
ggcaagtggagcacgctgctgaccgaactgctggagttcaagcgcagctacgacgccaac
gtcagtctcgacacctgcctcaagtgtgtcgcccaggaagatcctgtgcgctatcgcggt
atgggcctgcgcgatctgtgcgatcagctccacgcctgctaccgcagcaacgccaccgcc
aaacacctcaagcgcatgtacaccgtgctgccggaaatcgccatgaaaccggcccacgcc
tatgaccagttggtgcgcggcgaggtcgaggcggtgccgatcgatgagctggaaggccgg
gtggcggcggtgatgctggtgccgtacccgccgggcattccgctgatcatgcccggcgaa
cgttttaccgaatccacgcgctcgatcatcgaatacctcaggtttgcccgcacgttcgac
gcaacgtttccggggttcgtggtcgatgtgcacggtctgcaacacgaagatgagggcaat
gggcggcactacaccgtcgattgcgtcaaggaatga
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