Pseudomonas fitomaticsae: KJY40_17810
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Entry
KJY40_17810 CDS
T08740
Symbol
tssK
Name
(GenBank) type VI secretion system baseplate subunit TssK
KO
K11893
type VI secretion system protein ImpJ
Organism
pfit
Pseudomonas fitomaticsae
Pathway
pfit02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
pfit00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
KJY40_17810 (tssK)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
pfit02044
]
KJY40_17810 (tssK)
Secretion system [BR:
pfit02044
]
Type VI secretion system
Imp/Vas secretion system core components
KJY40_17810 (tssK)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
T6SS_VasE
Motif
Other DBs
NCBI-ProteinID:
UFP97912
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Position
complement(3990879..3992210)
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AA seq
443 aa
AA seq
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MSLLPDAVCWHEGMQLLPQHFQLQGLRAEALGAHLAQACNPWFFGVSHMEFDPSAMSAGV
VRVLSLQGTMPDGLPVNLQVGVDPTLELDVGPAIDATDDATVTVYLAISPLWRAGQLLPL
KGRLQSVVGEALPDLTSGEFPESITVWRPNPRLCTQLNKADSICLPLLKIRKEGGGFLPL
PYTPPTPVLLPESPLGRRVAGLCARAREKCLFLGGRLRQAQQAGNQDDALEIRRQMTALW
ARLPEVEGALISRVAHPQSLYVQLLGLAGAWSALDPLAGVPAFAPLDFLELQRGYEPLLD
WLENTLELIRAGYRSIAFERGEQSFSIQLPDEQPSQRLVIGLRMPNGASEQAAGEWLRGA
IIASAPHIALLSRQRMSGLTHQAMSRSEQVAYSVGDDTRLFVVTAEGSWFDAQLPLMIAA
PATKLTSSPWQVVLFVAQNSERA
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atgagtctgctacctgacgcggtctgctggcatgaaggcatgcaattgctgccacagcac
tttcagttacagggcctgcgggccgaggcgctcggtgcgcatctggcccaggcgtgcaac
ccgtggtttttcggcgtcagtcacatggagttcgacccgtcggcgatgagcgccggagta
gtgcgggtgctgtcgttgcaagggacgatgccggacggtctgccggtcaatctgcaagtc
ggcgtcgatccgacgctggaactggatgtcggcccggcgattgacgccacggacgatgcg
acggtgacggtttatctggcgatcagtccgctgtggcgcgccggtcagttgctgccactc
aaggggcgtctgcaatcggtggtcggtgaggcattgccggatctcaccagcggcgaattt
cctgaatcgatcacggtgtggcgtcccaatccacggctgtgtacgcaactcaacaaagcg
gattcaatctgcctgccgctgctgaaaatccgcaaggagggcggcggttttctgccgttg
ccgtacacgccgccgacaccggtcctgctgccggaatcccccttgggtcggcgagtggcc
gggctctgtgcgcgggcgcgggagaagtgtctgtttcttggcgggcgattgcgtcaggcg
caacaggccggcaatcaggatgacgcgctggaaatccgtcggcagatgacggcgctgtgg
gcgcgcttgccggaagtggaaggggcgctgatcagtcgtgtcgctcatccgcaaagcctt
tatgtgcaactgctgggacttgctggcgcgtggtcggcgctggatccgctggcgggtgta
ccggcttttgcgccactggattttctcgaattgcagcgcggttacgaaccgctgctcgac
tggctggaaaacactctggaactgatccgcgccggttatcgcagcatcgcgttcgagcgc
ggcgagcagagtttttccattcagttgccggacgagcaaccgagccagcgtctggtcatc
ggcctgcgcatgcccaacggtgccagcgagcaggccgccggcgaatggctgcgcggcgcg
atcatcgcttcggcgccgcacatcgcgttgctcagccgccaacgcatgagcggtctgacg
catcaggccatgagccgaagcgagcaggtggcttacagcgtcggcgacgacacccggctg
ttcgtggtgaccgccgaaggtagctggttcgacgcgcaactgccgctgatgatcgccgcg
ccagccaccaaactgaccagcagtccgtggcaagtggtgttgtttgtcgcccagaacagt
gaacgtgcctga
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