Pseudomonas fitomaticsae: KJY40_17850
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Entry
KJY40_17850 CDS
T08740
Symbol
tssH
Name
(GenBank) type VI secretion system ATPase TssH
KO
K11907
type VI secretion system protein VasG
Organism
pfit
Pseudomonas fitomaticsae
Pathway
pfit02025
Biofilm formation - Pseudomonas aeruginosa
pfit03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
pfit00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
KJY40_17850 (tssH)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
KJY40_17850 (tssH)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
pfit02044
]
KJY40_17850 (tssH)
Secretion system [BR:
pfit02044
]
Type VI secretion system
Imp/Vas secretion system core components
KJY40_17850 (tssH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
AAA
AAA_5
Clp_N
AAA_16
AAA_22
nSTAND3
AAA_25
Zeta_toxin
AAA_7
ResIII
AAA_14
T2SSE
ClpB_D2-small
IstB_IS21
Sigma54_activat
AAA_28
NACHT
SRP54
AAA_23
FtsK_SpoIIIE
AAA_24
IPT
DUF7310
Motif
Other DBs
NCBI-ProteinID:
UFP97920
LinkDB
All DBs
Position
3998789..4001329
Genome browser
AA seq
846 aa
AA seq
DB search
MELASLIGRLNPDNRRALERAAQRCLQRGHHFVEIEHLLLELLDIEGGDFAFLLPRFGLE
RDALTAEINKALDLFKAGSTRTPALSSHTLGLLEDAMVQASVLGIDSIRSGLLLLALIDR
DERRSLLLNSASTLLRIPKEALRANLLEWTENSREHVGPRSVSSGSPTPRQDSVLDQYTQ
DLTADAHAGRIDPIVGRDGEIRQCIDILLRRRQNNPILVGAPGVGKTAVVEGLALRIAAG
DVPPSLQEVSLRVLDLGLLQAGAGVKGEFEQRLKGVIDAVRSADKPIILFIDEAHTLIGA
GGAEGGSDAANLLKPALARGELRTLAATTWMEYKKYFEKDPALARRFQLVQVEEPDEITA
VEMLRGVAAKLEQHHGVQVLDAAIHEAVKLSHRYISGRQLPDKAISVLDTACARVALGQH
DVPPPLESLRHRQQSLKEEVERLRREQATGLDHRERITLLESESKTNVQAIRELETRWGE
ERVAVRELLDTRRELLALSESADSDKPDEAIDSRIDHLAAELLRLEAGLDAIRQDDPLVP
EQVDGKTVAAVIAGWTGIPVGKMLADEAHAVRTLGTRMGQRVMGQRTALNTIAQRLQAYR
AGLTDPQKPVGVFLLVGPTGVGKTETAYALADALYGGERNLISINLSEYQEAHTVSQLKG
APPGYVGYGSGGVLTEAVRRKPYSVVLLDEIEKAHPDVLEAFYNVFDKGLMEDGTGLVVD
FKNTVMLATSNVGAELLLDTPVAQLGSEAFNEALHKVLLQAFRPAFLARMTVVAYRPLDE
ATLEGIVLAKLEKLRGRYKAATGKQFEFDSGIVKAVLAKCSAAGARDVENVLMTQVTGKL
AEWVLE
NT seq
2541 nt
NT seq
+upstream
nt +downstream
nt
atggaactggccagcctgatcggacgcctcaacccggacaaccgccgcgcccttgaacgt
gccgcgcaacggtgcttgcagcgcgggcatcactttgtcgagatcgagcatttgttgctg
gaattgctggatatcgagggcggcgattttgcgtttctgctgccgcgttttgggttggaa
cgggatgcgctgacggcagagatcaacaaggcgcttgacctgttcaaggctggcagcacg
cgcacgccggcattgtcatcgcacacgttggggttgctggaagacgcgatggtgcaggcc
agtgtgttgggcatcgacagcattcgttccggactgcttttattggcgttgatcgaccgt
gacgagcgccgcagcctgctgctcaacagtgcgtcgacattgttgcgaattcccaaagaa
gccctgcgcgcaaatctgctggagtggacggaaaactctcgcgagcacgttggcccgcgc
tccgtatcttcggggagtccaacgccacggcaagactcggtgctcgatcaatacacccag
gacctgaccgccgacgcccatgccgggcgcatcgacccgatcgtcggtcgcgatggcgag
attcgtcagtgcatcgacattcttttaagacgtcggcagaacaatccgattctggtcggc
gcacccggcgtcggcaaaaccgccgtagtcgaaggcctggcgctgcgcatcgccgccggg
gacgtgccgccgtcgttgcaggaagtcagtttgcgggtgctcgatctcggtctgttgcag
gccggggccggggtcaaaggcgagttcgaacagcggctcaaaggggtgatcgacgcggtt
cgcagcgccgacaaaccgatcatcctgtttatcgacgaggcccacacactgatcggcgct
ggcggtgccgaaggtggcagcgatgcggccaacctgttgaaaccggcgctggctcgcggc
gaactgcgtaccctcgctgccacaacatggatggaatacaaaaaatatttcgagaaagac
ccggccctcgcccgccgttttcaactggtgcaggtggaagaaccggatgaaatcaccgcc
gtggaaatgctccgtggcgtcgccgccaaactcgaacagcatcacggcgtgcaggtgctg
gatgccgcgatccatgaagcggtgaaactctcgcaccgctatatctctggccgccagttg
ccggacaaagccatcagcgtcctcgacaccgcctgcgcccgggtcgccctaggccagcac
gacgtaccgccgccgctggagagcctgcgccatcgtcagcaaagcctcaaggaagaagtc
gaacgcctgcgtcgggaacaggccacgggacttgatcaccgcgagcgcatcaccctgctg
gaaagcgaatcgaagaccaacgtccaggccatccgcgaactggaaacccgttggggcgaa
gagcgcgtcgccgtgcgcgaactgctcgacacccgtcgcgagttgctggcgttgagcgaa
agcgccgacagcgacaaacccgacgaagccatcgacagccgcatcgatcacctcgccgcc
gaactgctgcgcctggaagccggcctcgatgcgattcgccaggacgatccgctggtgccc
gaacaggtcgacggcaaaaccgtcgccgccgtgatcgccggctggaccggcattcccgtc
ggtaaaatgctcgccgatgaagcccacgccgtgcgcaccctcggcacgcgcatgggccaa
cgtgtgatgggccagcgaaccgcgctcaacaccatcgcccagcgtttgcaagcctatcgc
gcggggcttaccgatccgcaaaaaccggtcggcgtgtttctgctggtcggccccacgggc
gttggcaaaaccgaaaccgcgtacgcgctggccgatgccttgtacggcggcgaacgcaat
ctgatcagcatcaatctttcggaatatcaggaagcgcacaccgtcagccagctcaagggc
gcaccacccggttacgtcggttacggaagtggcggcgtgctgaccgaagccgtgcggcgc
aaaccctattcggtggtgttgctggatgaaatcgagaaggcgcatccggatgttctggaa
gccttctacaacgtcttcgacaagggcttgatggaagacggcaccgggctggtggtggat
ttcaagaacaccgtgatgctcgccaccagcaatgtcggcgctgagcttttactcgacacg
ccggttgcacaacttggttccgaggcgttcaacgaagcgctgcacaaagtcctgctgcaa
gccttccgcccggcgtttctggcgcgcatgacggtggttgcgtatcgaccgctggatgag
gcgacgctggaagggattgtgctggcgaaactggagaaattgcgtggtcgctacaaggca
gcgaccggcaagcagttcgagtttgattcgggaatcgtcaaagcggtactcgccaaatgc
agcgcggcgggggctcgggatgtcgagaacgtgttgatgacgcaggtgacagggaaattg
gcggagtgggtgttggagtag
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