Pseudomonas fitomaticsae: KJY40_19060
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Entry
KJY40_19060 CDS
T08740
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
pfit
Pseudomonas fitomaticsae
Brite
KEGG Orthology (KO) [BR:
pfit00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pfit03032
]
KJY40_19060
03036 Chromosome and associated proteins [BR:
pfit03036
]
KJY40_19060
03400 DNA repair and recombination proteins [BR:
pfit03400
]
KJY40_19060
DNA replication proteins [BR:
pfit03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
KJY40_19060
Chromosome and associated proteins [BR:
pfit03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
KJY40_19060
DNA repair and recombination proteins [BR:
pfit03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
KJY40_19060
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_1
Barstar
Motif
Other DBs
NCBI-ProteinID:
UFP98149
LinkDB
All DBs
Position
complement(4255494..4255766)
Genome browser
AA seq
90 aa
AA seq
DB search
MNKSELIDAIAASADIPKAAAGRALDAVIESVTGALKAGDSVVLVGFGTFSVTDRPARIG
RNPQTGKTLEIAAAKKPGFKAGKALKEAVN
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
gtgaacaagtcggaactgattgatgctatcgctgcatccgctgatatcccgaaagctgct
gctggccgtgcgctggacgctgtaatcgaatccgtcactggcgctctcaaggctggcgac
tccgttgttctggttggcttcggtactttctccgtgactgatcgtccagctcgcatcggt
cgtaacccacagaccggcaagactctggaaatcgcggcagccaaaaagccaggtttcaaa
gccggtaaagccctgaaagaagccgtcaactaa
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integrated database retrieval system
