Pseudomonas fitomaticsae: KJY40_19925
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Entry
KJY40_19925 CDS
T08740
Name
(GenBank) DEAD/DEAH box helicase
Organism
pfit
Pseudomonas fitomaticsae
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Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
DEAD
ResIII
SWIM
Motif
Other DBs
NCBI-ProteinID:
UFP98311
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Position
4457690..4460380
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AA seq
896 aa
AA seq
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MPPPLSKPLASSWVSRFKEQSLERGRRYALENRVRFVQVGDATITASCEGSGGNVYRQTI
HLRESAKGTLLMVDATCTCPVHSNCKHCAAVLLQVQETLEYPAAAKDAELLEKLQAVLEN
RSPKAPPQVLVDNVQPVPRLWLASVEFSAFEPRNGKMQRYIQHRAALSFSYLDEYVSGQK
NSDILIRQEAQTLRVKRHPDVEQSYREQLRILGFRIATRQSKALPESAGELYEMVNDSAW
LTFTLNDLPKLRTQGWELLVDDEFGFDLTAVDDWYATVEQAPERDWFDLELGIIVNGERL
SLLPILLNLMRSHTEILNPERLARRRDDELILVNIPQRNSEHGPLQVALPLGRLKPVLAT
LGEFYLQEPGETTLRLSKADATRLNSLEGIPLLWEGGEQIRSFAQRLRDIRDYSAKAPKG
LNATLRPYQLEGLSWMQSLRQLEVGGILADDMGLGKTLQTLAHILSEKNAGRLDRPCMVV
MPTSLIPNWLDEAAHFTPQLKVVALYGASRKKHFEHLADYDLILTTYALLPKDVERLAQQ
PLHVLVLDEAQYIKNPNSKAAQAARELNARQRLCLSGTPLENHLGELWSLFHFLLPGWLG
DVKSFNADYRVPIEKRASEVRLQHLNGRIKPFLLRRTKEQVATELPPKTEIIHWVELNEA
QRDVYETMRLAMDKKVRDEITRKGVARSQIIILEALLKLRQVCCDLRLVNDATLPARGST
SGKLDSLMEMLEELFEEGRRILLFSQFTSMLSLIEDELKKRNVAYALLTGQTRDRRTPVK
EFQSGKRQIFLISLKAGGVGLNLTEADTVIHYDPWWNPATENQATDRAYRIGQEKPVFVY
KMIARGTVEEKIQHLQREKSDLAAGVLDGRKAGDWKLQSDDIEALFAPLPDKFEKR
NT seq
2691 nt
NT seq
+upstream
nt +downstream
nt
atgcccccgccactgagtaaaccgctggcctcctcctgggtcagccgattcaaggaacaa
agtctggagcgtggccgccgctacgcgctggaaaaccgggtgcgattcgtgcaggtcggc
gacgcgaccattaccgccagctgcgaaggctctggcggtaacgtctaccgtcagacgatt
cacctgcgcgagtcagccaaaggcacgctgctgatggtcgacgccacctgcacctgcccg
gttcacagcaactgcaaacactgtgcggcggtattgctgcaagtgcaggaaaccctcgaa
taccccgccgctgccaaagacgccgaactgctggaaaaactccaggccgtgctggaaaac
cgcagcccgaaggcgccaccgcaagtgctggtggacaacgtgcaaccggtgccgcgtctg
tggctggcgagtgtcgagttcagcgcgttcgagccgcgcaacggcaagatgcagcgttac
atccagcatcgtgcggcgctgtccttcagctacctcgacgaatacgtcagcgggcaaaag
aacagtgacatcctgattcgccaggaagcccagaccctacgggtcaaacgccatccggac
gtcgaacagagctaccgcgagcaactgcgaattctcgggttccgcatcgccacccgccag
agcaaggctctaccggaaagcgccggcgaactctacgagatggtcaacgacagcgcctgg
ctgaccttcaccctcaacgatctgccgaagctgcgcacccagggctgggagctgctggtc
gacgatgaattcggtttcgacctgaccgccgtcgacgactggtacgccaccgtcgagcag
gcgccggaacgcgactggttcgatctggagctggggatcatcgtcaacggtgagcgcctg
agcctgctgccgatcctgctcaatctgatgcgctcgcacacggaaatcctcaacccggaa
cgtctcgcccgccgtcgcgacgatgaactgattctggtgaacatcccgcaacgcaacagc
gagcacggaccgctgcaagtcgccctgcccctcggccggctgaaaccggtgctggcgacc
cttggcgagttttatttgcaggagccgggcgaaaccaccctgcgactgagcaaggccgac
gccacacgcctgaattcgctggaaggcattcccctgctctgggagggtggcgagcagatt
cgcagcttcgcccagcgcttgcgcgacatccgtgattacagcgccaaagcaccgaagggg
ctgaatgcaacgctgcgtccttatcagctcgaaggcttgagctggatgcagtcgctgcgg
caacttgaggtcggcgggattctcgcggacgacatgggcctgggcaaaaccctacagacc
ctggcgcatattctcagcgagaagaacgccgggcgcctggatcggccctgcatggtggta
atgcccacaagcctgatccccaactggctggacgaagcggcgcacttcacgccacagctc
aaggtggtggccctgtacggtgccagccgtaaaaagcatttcgagcatctggccgattac
gacctgatcctcaccacttatgcactgctgcccaaggatgtcgaacgtctggcccagcag
ccgctgcatgtactggtgctggatgaggcgcagtacatcaagaacccgaatagcaaagcc
gcccaggctgcccgtgaactcaatgctcgtcagcgcctgtgcctgagcggaacgccgctg
gaaaaccacttgggcgaactgtggtcgctgtttcacttcctgttgcccggctggctcggc
gacgtcaaaagcttcaacgccgattaccgcgtgccgatcgaaaagcgcgccagcgaagtc
agacttcagcacctcaacggtcggatcaaaccgttcctgctgcgccgcaccaaggaacag
gttgcgaccgagctgccgccaaaaaccgagatcattcactgggtcgaactcaacgaggcc
cagcgcgacgtgtacgaaaccatgcgcctggccatggacaagaaggttcgcgacgagatc
acccgcaaaggtgtggcacgcagccagatcatcattctcgaggcgttgctcaagctgcgg
caggtctgctgcgacttgcgcctggtcaacgacgccaccctgcccgctcgcggcagcaca
tcgggcaagctcgacagcctgatggaaatgctcgaggagttgtttgaggaaggccggcgg
attctgctgttctcgcagttcacttcgatgctgtcactgatcgaggacgagctgaaaaaa
cgcaatgtcgcgtatgcgctgttgacgggacagactcgtgatcggcgtacaccggtgaag
gaattccagagcggcaagcgtcagatctttctcatcagcctgaaggctggcggtgtgggt
ctgaacctgacggaagcggacacggtgattcactacgatccgtggtggaacccggcgacg
gagaatcaggcaaccgaccgtgcgtatcgcattggtcaggagaagccggtgttcgtctac
aagatgattgcccggggcacggtcgaagagaaaattcagcacttgcagcgggaaaaatcc
gacctggcagccggcgtgctggacgggcgcaaggccggggactggaagttgcagagtgat
gatatcgaggcgctgtttgcgccgttgccggacaagtttgaaaagcgctga
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