Pseudomonas fitomaticsae: KJY40_19980
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Entry
KJY40_19980 CDS
T08740
Symbol
fadB
Name
(GenBank) fatty acid oxidation complex subunit alpha FadB
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
pfit
Pseudomonas fitomaticsae
Pathway
pfit00071
Fatty acid degradation
pfit00280
Valine, leucine and isoleucine degradation
pfit00310
Lysine degradation
pfit00362
Benzoate degradation
pfit00380
Tryptophan metabolism
pfit00410
beta-Alanine metabolism
pfit00640
Propanoate metabolism
pfit00650
Butanoate metabolism
pfit00907
Pinene, camphor and geraniol degradation
pfit00930
Caprolactam degradation
pfit01100
Metabolic pathways
pfit01110
Biosynthesis of secondary metabolites
pfit01120
Microbial metabolism in diverse environments
pfit01200
Carbon metabolism
pfit01212
Fatty acid metabolism
Module
pfit_M00087
beta-Oxidation
pfit_M00957
Lysine degradation, bacteria, L-lysine => glutarate => succinate/acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
pfit00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
KJY40_19980 (fadB)
00650 Butanoate metabolism
KJY40_19980 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
KJY40_19980 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
KJY40_19980 (fadB)
00310 Lysine degradation
KJY40_19980 (fadB)
00380 Tryptophan metabolism
KJY40_19980 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
KJY40_19980 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
KJY40_19980 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
KJY40_19980 (fadB)
00930 Caprolactam degradation
KJY40_19980 (fadB)
Enzymes [BR:
pfit01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
KJY40_19980 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
KJY40_19980 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
KJY40_19980 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
KJY40_19980 (fadB)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_binding_2
Motif
Other DBs
NCBI-ProteinID:
UFP98321
UniProt:
A0ABY3PWH9
LinkDB
All DBs
Position
complement(4469854..4472001)
Genome browser
AA seq
715 aa
AA seq
DB search
MIYEGKAITVKALESGIVELKFDLKGESVNKFNRLTLNELRQAVDTIKADASIKGVIVSS
GKDVFIVGADITEFVDNFKLPDAELVAGNLEANKIFSDFEDLNVPTVAAINGIALGGGLE
MCLAADYRVMSTKAKIGLPEVKLGIYPGFGGTVRLPRLIGADNAIEWIAAGKENRPEDAL
KVGAVDAVVAPEKLQDAALELIKRAVSGEFDYKAKRQPKLEKLKLNAIEQMMAFETAKGF
VAGQAGPNYPAPVEAIKTIQKAANFGRDKALEVEAAGFVKLAKTSAAQSLIGLFLNDQEL
KKKAKAYDEIAKDVKQAAVLGAGIMGGGIAYQSASKGTPILMKDINEHGIEQGLAEAAKL
LVGRVDKGRMTAAKMAEVLNGIRPTLSYGDFGHVDLVVEAVVENPKVKQAVLAEVEDKVK
EDTILASNTSTISISLLAKALKRPENFVGMHFFNPVHMMPLVEVIRGEKSSELAIATTVA
YAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFAKLVSAGVDFVRIDKIMEKFGWPMGPAYL
MDVVGIDTGHHGRDVMAEGFPDRMKDDRRSAIDVLYEAKRLGQKNGKGFYAYEADKKGKQ
KKVADPSVLEVLKPIVYEQREVTDEDIINWMMIPLCLETVRCLEDGIVETAAEADMGLVY
GIGFPPFRGGALRYIDSIGVAEFVALADQYADLGALYHPTAKLREMAKNGQSFFG
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgatttacgaaggtaaagccatcacggttaaagctcttgaaagtggcatcgtcgaattg
aaattcgacctcaagggtgagtccgtcaacaagttcaaccgtcttaccctgaacgaactg
cgtcaggccgtagacaccatcaaggcagatgcttcgatcaagggcgtgatcgtcagcagt
ggcaaggacgtgttcatcgtcggcgccgacatcaccgaatttgtcgacaacttcaagctg
ccggatgccgagctggttgctggcaatctcgaagccaacaagatcttcagcgatttcgaa
gacctcaacgttccgaccgtcgccgcgatcaatggcatcgccctgggtggcggtctggaa
atgtgcctggcagcggactaccgcgtcatgtcgaccaaggccaagatcggtctgccggaa
gtcaaactgggcatctacccgggcttcggcggtactgtgcgtctgccgcgcctgatcggt
gccgacaacgccatcgagtggattgccgccggcaaggaaaaccgtcctgaagacgcgctg
aaagtcggcgctgtcgatgccgtggttgcccctgaaaaactgcaggatgccgcccttgag
ctgatcaagcgcgccgtctccggcgagttcgactacaaggccaagcgccagcccaagctg
gaaaagctcaagctgaacgccattgaacaaatgatggctttcgaaaccgccaaaggtttc
gtggctggccaggctggcccgaactacccggccccggtcgaagcgatcaagaccatccag
aaagccgcgaacttcggtcgtgacaaggcgctggaagtcgaagccgcaggtttcgtgaaa
ctggccaagacctctgccgcgcagagcttgatcggtctgttcctgaacgatcaggagctg
aagaaaaaggccaaggcctacgacgaaatcgccaaggacgtgaagcaggctgccgtactg
ggcgccggcatcatgggtggcggtatcgcctatcagtcggcctccaaaggtacgccgatc
ctgatgaaggacatcaacgagcacggcatcgagcaaggtcttgctgaagccgccaagctg
ctggtcggtcgcgttgataaaggccgcatgaccgccgcgaaaatggctgaagtgctcaac
ggcattcgtccgactctgtcctacggtgatttcggtcacgtcgacctggtcgttgaagcc
gtggtcgagaacccgaaagtcaagcaagccgttctggcggaagtcgaagataaggtcaaa
gaggacaccatcctcgcgtccaatacttcgaccatttccatcagcctgctggccaaggcc
ctcaagcgtccggaaaacttcgtcggcatgcacttcttcaacccggtgcacatgatgccg
ctggtggaagtgatccgtggcgagaagtccagtgagttggccatcgccaccaccgttgcc
tacgccaagaaaatgggcaagaacccgatcgtcgtcaacgactgcccgggcttcctggtc
aaccgcgtactgtttccgtacttcggcggtttcgccaagctggtcagcgccggtgtggac
ttcgtccgtatcgacaagatcatggaaaaattcggctggccgatgggcccggcatacctg
atggacgtggtcggcatcgacaccggccaccacggtcgtgacgtgatggctgaaggcttc
ccggatcgcatgaaggacgaccgtcgttcggccatcgacgtgctttacgaagccaagcgt
ctgggtcagaagaacggcaagggcttctatgcctacgaggccgacaagaaaggcaagcag
aagaaagtcgccgacccgtcggtactggaagtgctcaagccgatcgtctacgagcagcgc
gaagtcactgacgaagacatcatcaactggatgatgatcccgctgtgccttgaaaccgtg
cgttgcctggaagacggcatcgtcgaaaccgccgccgaagccgacatgggtctggtctac
ggtattggtttccctccattccgtggcggtgcgctgcgctacatcgactcgatcggtgtt
gccgagttcgttgccctggccgaccagtacgctgatttgggcgcgctgtaccacccgacc
gcgaagctgcgtgaaatggccaagaacggccagagcttcttcggttaa
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