Pseudomonas fitomaticsae: KJY40_20100
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Entry
KJY40_20100 CDS
T08740
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
pfit
Pseudomonas fitomaticsae
Brite
KEGG Orthology (KO) [BR:
pfit00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pfit03000
]
KJY40_20100
Transcription factors [BR:
pfit03000
]
Prokaryotic type
Helix-turn-helix
Other families
KJY40_20100
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
HTH_8
AAA_lid_14
GAF
AAA_5
Mg_chelatase
HTH_30
AAA_2
HTH_1
DUF134
HTH_23
HTH_28
AAA
HTH_7
HTH_20
HTH_22
Mga
HTH_29
AAA_7
HTH_11
Diguanyl_cycl_sensor
PAS_9
nSTAND3
HTH_50
HTH_17
Motif
Other DBs
NCBI-ProteinID:
UFP98345
UniProt:
A0ABY3PX62
LinkDB
All DBs
Position
complement(4500346..4502250)
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AA seq
634 aa
AA seq
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MTLIKTTDPKSHHEARLAREKLHLEGQVPDGVLRAEIDASWRRSLSHGVHFNGKHELALE
SGASLDVLLASNRLLIDAAIPAIDYLAERQGKEGLIILANSDATILAVEGRADRLKGSGL
QDITLGACWSEAARGTNALGTALVEARPTLIDCGEHYLDRLTDFSCTSVPIHCPQGEILG
VLDLTREGPLGRVHDSTALLSMAVSQIESRVFNNSFPDQIVLAFHSRRQYLESPWQGLLA
VSLGGQILAVSAQACQLLRAERSALVGRRCEEFLGVDGVQLLTRLQQGGVGSVQTAKGEF
FYKTLRAPARSVNLGGPPRSVAKTAKAQPDLEALAGNNARYARALRMARQGLANELPVLL
LGETGTGKEVIARALHLAGSRSDKPFVAVNCAAIPEGLIESELFGYREGAFTGSRRGGMI
GRLQQAHGGTLFLDEIGDMPLALQARLLRVLQDRKVAPLGAGEEQDIDVALICATHRDLK
RQVEDKQFREDLFYRVNGISVMLPALRERDDFSALVTRLLGKLDAPNAVLHDDLNRLLGA
YHWPGNIRQLEMVLRTALAMREPGETVLTLDHLPDSMLDELSATEKPQTGSIRENELEMI
RQSLDTHQGNVSAAADALGISRATLYRKLKQLRS
NT seq
1905 nt
NT seq
+upstream
nt +downstream
nt
atgactcttataaaaacaaccgatcccaagtctcaccacgaagcccggctggcccgggaa
aaactccatctcgaagggcaggtcccggatggcgtgttgcgtgcggagatcgatgcttcg
tggcggcgcagcctgagccacggcgtgcatttcaatggcaagcatgagctggcgctggaa
tcgggcgcgagtctcgatgtgctgctggcgagcaatcgcctgctgatcgatgcggcgata
ccggctatcgattatctggccgaacgtcagggcaaggaaggcctgatcatcctcgccaat
tccgatgccaccatcctcgccgtcgagggacgtgccgaccggctcaagggcagcggtctg
caggacatcaccctcggcgcctgctggagcgaagccgcccgtggcaccaatgccctcggc
acggcgctggtcgaagcgcgccccaccctgatcgattgcggcgaacactaccttgaccgc
ctcaccgatttttcctgcacctcggtgccgattcattgcccccagggcgagattcttggc
gttcttgacctgacccgcgaaggccccctcggccgcgttcacgacagcaccgcgctgctg
agcatggcggtcagccagatcgagagtcgggtgttcaacaacagctttcccgatcagatc
gtcctcgccttccacagccgccggcagtatctggaatcgccatggcaagggctgctggcg
gtgagtctcggtgggcagattctggcggtcagcgcccaggcctgtcagttgctgcgggcc
gagcgttcggcgctggtcgggcggcgttgcgaagaattcctcggggtcgatggcgtgcaa
ttgttgacccgtctgcaacagggcggtgtcggcagcgtgcagaccgccaagggcgagttt
ttctacaagaccctgcgggctccggcgcgctcggtcaacctgggtggcccaccccgcagc
gtggcgaaaaccgccaaggcgcaaccggatctggaagcattggccggcaacaacgcccgc
tacgcccgcgccctgcgcatggcccgccaaggtctggccaatgaactaccggtgctgttg
ctcggcgaaaccggcaccggtaaagaagtgatcgcccgcgccctgcacctggccggcagc
cgcagcgacaaaccctttgtggccgtgaattgcgcggcaattcccgaaggcctgattgag
tcggaactgttcggctaccgcgaaggcgcgttcaccggatcgcgccgtggcggcatgatc
gggcgcctgcaacaggcccacggcggcactttgttcctcgatgaaatcggcgacatgccg
ctggccttgcaagcgcggctgctgcgcgttctgcaagatcgcaaagtcgcgccgctgggt
gccggggaagaacaggatatcgacgtcgcactgatctgcgccacccaccgcgacctcaag
cgtcaggtcgaggacaagcaatttcgcgaggacttgttctaccgggtcaacggcatcagc
gtgatgctcccggccctgcgcgagcgtgatgacttcagcgcgctggtcactcgactgctg
ggcaaactcgatgcaccgaacgccgtgctgcacgacgacctcaatcgcctgctcggcgct
tatcactggccgggcaacatccgccaactggaaatggtcttgcgcaccgctttggccatg
cgcgaacccggtgaaacggtgctgaccctcgatcacctgcccgacagcatgctcgacgaa
ctgtccgccaccgagaaaccccagaccggcagcattcgtgagaacgaactggagatgatc
cgccagtccctcgacacccaccagggcaatgtctcggccgcggccgacgccctcggcatc
agccgcgcgaccctgtatcgcaaactcaaacagttgcgctcgtga
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