Pseudomonas fitomaticsae: KJY40_21045
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Entry
KJY40_21045 CDS
T08740
Symbol
gyrA
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
pfit
Pseudomonas fitomaticsae
Brite
KEGG Orthology (KO) [BR:
pfit00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pfit03032
]
KJY40_21045 (gyrA)
03400 DNA repair and recombination proteins [BR:
pfit03400
]
KJY40_21045 (gyrA)
Enzymes [BR:
pfit01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
KJY40_21045 (gyrA)
DNA replication proteins [BR:
pfit03032
]
Prokaryotic type
DNA Topoisomerases
KJY40_21045 (gyrA)
DNA repair and recombination proteins [BR:
pfit03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
KJY40_21045 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
UFP98517
LinkDB
All DBs
Position
complement(4699860..4702523)
Genome browser
AA seq
887 aa
AA seq
DB search
MGELAKEILPVNIEDELKQSYLDYAMSVIVGRALPDARDGLKPVHRRVLFAMSELGNDFN
KPYKKSARVVGDVIGKYHPHGDTAVYDTIVRMAQPFSLRYLLVDGQGNFGSVDGDNAAAM
RYTEVRMTKLAHELLADLHKETVDWVPNYDGTELIPAVMPTRVPNLLVNGSSGIAVGMAT
NIPPHNLGEVIDGCLALIDNPELTVDELMQYIPGPDFPTAAIINGRAGIIEAYRTGRGRI
YMRARSIIEDIDKVGGRQQIVITELPYQLNKARLIEKIAELVKEKKLEGITELRDESDKD
GMRVVIELRRGEVPEVILNNLYAQTQLQSVFGINIVALIDGRPRILNLKDLLEAFVRHRR
EVVTRRTVFELRKARERGHILEGQAVALSNIDPVIALIKASPTPSEAKEALVSTPWESTA
VVAMVERAGADSCRPENLDPQYGLRDGKYFLSPEQAQAILELRLHRLTGLEHEKLLAEYQ
EILNQIGELIRILNSAVRLMEVIREELEVIRAEYGDVRRTEILDARLDLTLGDMIPEEER
VVTISHGGYAKTQPLAAYQAQRRGGKGKSATGVKDEDYIAHLLVANSHTTLLLFSSKGKV
YWLKTYEIPEASRAARGRPLVNLLPLDDGEYITTMLPVEEYTEGHYIFMATANGTVKKTP
LESFSRQRSVGLIALELDEGDVLISAAITDGEREVMLFSDGGKVTRFKESDVRAMGRTAR
GVRGMRLPEGQKLISMLIPEEGSQILTASERGYGKRTAITEFPEYKRGGQGVIAMVSNER
NGRLVGAVQVLDGEEIMLISDQGTLVRTRVDEVSSLGRNTQGVTLIKLAKDETLVGLERV
QEPSEVEGEEFEGEEGVELEEGVIGAEPDDAVDNLQADAADEEESQD
NT seq
2664 nt
NT seq
+upstream
nt +downstream
nt
atgggcgaactggccaaagaaatcctcccggtcaatatcgaagacgagctgaaacagtcc
tatctcgactacgcgatgagcgtgatcgtcggccgtgcactgccggatgcgcgcgatggc
ttgaagcccgtgcaccgtcgcgtgctgttcgcgatgagcgagctgggcaacgacttcaac
aagccgtacaagaaatctgcccgtgtcgtcggtgacgtgatcggtaagtatcacccgcac
ggtgataccgcggtgtacgacaccatcgtccgtatggcgcagccattctcgctgcgttat
ctgctggtggacggccagggcaacttcggttcggtggacggcgacaacgccgcggccatg
cgatacaccgaagtgcgcatgaccaagctggcgcacgagctgctggccgacctgcacaag
gaaaccgtggactgggtgccgaactacgacggcaccgaactgatcccggcggtcatgccg
acccgcgtaccgaacctgctggtcaacggttccagcggtatcgccgtgggcatggcgacc
aacattccgccgcacaacctcggtgaagtcatcgacggttgcctggccctcatcgacaac
cccgagctgaccgtcgatgagctgatgcaatacattcccggcccggacttcccgaccgcc
gcgatcatcaacggtcgcgccggcatcatcgaagcctaccgcaccggccgtggccgcatt
tacatgcgcgcccgttcgatcatcgaagacatcgacaaggtcggtggccgtcagcagatc
gtcatcaccgaactcccttaccagctgaacaaggcgcgtctgatcgagaagatcgccgag
ctggtaaaagagaagaaactcgaaggcatcaccgagctgcgcgacgagtccgacaaggac
ggtatgcgcgtcgtgatcgagctgcgtcgcggcgaagtgcctgaggtgatcctcaacaac
ctctacgcccagacccagctgcaatcggtattcggcatcaacatcgttgcgctgatcgac
ggccgtccgcggatcctgaacctcaaggatctgctggaagccttcgtccgtcaccgtcgc
gaagtggttacccgccgtaccgtgttcgaactgcgcaaggcgcgcgagcgtggtcatatc
ctcgaaggtcaggccgttgccctgtcgaacatcgacccggtgatcgccctgatcaaggcg
tcgccgaccccgtcggaagccaaggaagcgctggtcagcacgccgtgggaatccactgcc
gtggtggcgatggtggaacgtgccggtgccgattcgtgccgtccggaaaacctcgatccg
caatacggtctgcgcgacggcaagtacttcctgtcgccggagcaggcgcaagccattctg
gaactgcgtctgcaccgcctgaccggtctggagcacgaaaagctgctggccgagtatcaa
gagatcctcaaccagatcggcgagctgatccgcatcctcaacagcgccgtgcgcctgatg
gaagtgatccgcgaagagctggaagtgatccgcgccgaatacggcgacgtgcgccgcacc
gaaattctcgatgcccgtctcgacctgactctgggcgacatgatcccggaagaagagcgt
gtcgtgaccatctcccacggcggctatgccaagacccagccgctggctgcgtaccaggcc
cagcgtcggggcggtaaaggcaaatcggctaccggcgttaaggatgaggactacatcgct
cacctgctggttgccaacagccacaccacgctgctgctgttctccagcaagggcaaggtg
tactggctgaagacctacgaaattccggaagcgtcccgcgccgcccgtggtcgtccgctg
gtcaacctgctgccgctggatgacggtgaatacatcaccaccatgctgccggtcgaggaa
tacaccgaaggtcactacatcttcatggcgaccgccaacggcaccgtgaagaagactccg
ctggaatccttcagtcgtcagcgcagcgtcggtctgatcgcgctggagctggatgaaggc
gacgtgctgatctccgcagccatcaccgatggcgagcgtgaagtgatgctgttctccgac
ggcggcaaggtcacccgcttcaaggaatccgacgttcgtgccatgggccgtaccgcccgt
ggtgtgcgcggcatgcgtctgccggaagggcagaagctgatttcgatgctgatcccggaa
gaaggcagccagatcctcaccgcttccgagcgtggttatggcaagcgcaccgcgatcacc
gagttccctgagtacaagcgtggcggccaaggcgtgatcgccatggtcagcaacgagcgt
aacggccgtctggtcggtgcggttcaggtgctcgacggcgaggagatcatgctgatttcc
gaccagggcacgctggtgcgtacccgtgtcgacgaagtctccagcctgggtcgtaacacc
cagggcgtgaccctgatcaagctggccaaggatgaaaccctggtcggtctggagcgggtt
caggagccgtcggaagtcgaaggtgaagagtttgaaggtgaagaaggtgtcgagctggag
gagggcgtgatcggcgccgagccggacgatgcggtcgacaacctgcaggcggacgccgca
gacgaagaagagtcgcaagactaa
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