Pseudomonas fitomaticsae: KJY40_23370
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Entry
KJY40_23370 CDS
T08740
Symbol
fadD2
Name
(GenBank) long-chain-fatty-acid--CoA ligase FadD2
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
pfit
Pseudomonas fitomaticsae
Pathway
pfit00061
Fatty acid biosynthesis
pfit00071
Fatty acid degradation
pfit01100
Metabolic pathways
pfit01212
Fatty acid metabolism
pfit02024
Quorum sensing
pfit04146
Peroxisome
Module
pfit_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
pfit00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
KJY40_23370 (fadD2)
00071 Fatty acid degradation
KJY40_23370 (fadD2)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
KJY40_23370 (fadD2)
09145 Cellular community - prokaryotes
02024 Quorum sensing
KJY40_23370 (fadD2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
pfit01004
]
KJY40_23370 (fadD2)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pfit04147
]
KJY40_23370 (fadD2)
Enzymes [BR:
pfit01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
KJY40_23370 (fadD2)
Lipid biosynthesis proteins [BR:
pfit01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
KJY40_23370 (fadD2)
Exosome [BR:
pfit04147
]
Exosomal proteins
Exosomal proteins of breast milk
KJY40_23370 (fadD2)
Exosomal proteins of breast cancer cells
KJY40_23370 (fadD2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_2
Motif
Other DBs
NCBI-ProteinID:
UFP98951
LinkDB
All DBs
Position
complement(5176052..5177740)
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AA seq
562 aa
AA seq
DB search
MQPDFWNDKRPAGVPLDIDAGEFKSVIEVFERSCKKFADRPAFSNMGVTLTYAELERQSA
AFAGYLQAHTDLVPGDRIAVQMPNVLHYPIAVFGALRAGLIVVNTNPLYTAREMRHQFKD
SGARALVYLNMFGQKVQEVLPDTDIQYLIEAKMGDLMPAAKGWLVNTVVSKVKKMVPAYS
LPQAISFKSALRMGRGLGIKPLKVGLDDIAVLQYTGGTTGLAKGAMLTHGNLVANMQQVR
ACLGQFGSDGQPLLREGQEVMIAPLPLYHIYAFTANCMCMMVSGNHNVLITNPRDIGGFI
KELKNWKFSALLGLNTLFVALMDHPDFKTLDFSTLKLTNSGGTALVKATAERWEQITGCR
ITEGYGLTETSPVACTNPYGELSRIGTVGLPVPGTRLKVINDDGVEQPLGERGELCIKGP
QIMKGYWQKPEATAEVLDAEGWFKSGDIAVIDPDGFVRIVDRKKDMIIVSGFNVYPNEIE
DVVMAHPKVANCAVIGVPDERSGEAVKLFVVARETGVSLEELKAYCKENFTAYKVPKHIV
LRESLPMTPVGKILRRELRDIA
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
atgcaacctgatttctggaatgacaaacgcccggcgggcgtacccctggacatcgacgcg
ggtgagttcaagtcggtgatcgaggtgttcgagcgttcctgcaagaaattcgctgatcgc
ccggcgttcagcaacatgggcgtgaccctgacctatgccgagctggagcgccagagcgcc
gcgttcgccggttatctgcaagcccacaccgacctggtgccgggggatcgcatcgcggtg
cagatgcccaacgtcctgcattatccgattgccgtgttcggtgcgctgcgtgccgggctg
atcgtggtcaacaccaacccgctgtacaccgcgcgggagatgcgtcaccagttcaaagac
tccggcgcccgggcgctggtgtacctgaacatgttcggccagaaggtccaggaagtgctg
ccggacaccgacatccagtatctgatcgaagcgaagatgggcgacctgatgcccgccgcc
aagggctggctggtcaacaccgtggtcagcaaagtgaagaagatggtgccggcatattcg
ctgccccaggcaatttccttcaagagcgcgctgcgcatgggccggggcctgggcatcaag
ccgctgaaggtcggcctggatgacatcgccgtgctgcaatacaccggcggcaccaccggc
ctggccaagggcgcaatgctcacccacggcaatctggtggcgaacatgcagcaggtgcgt
gcctgcctcggtcagttcggcagcgacggccaaccgttgttgcgcgaagggcaggaggta
atgatcgcgccgctgccgctgtaccacatctatgccttcaccgcgaattgcatgtgcatg
atggtgtcgggcaaccacaacgttctgatcaccaacccgcgtgacatcggtggcttcatc
aaggagctgaagaactggaagttctcggcgctgctggggctcaacacgctgtttgtcgcg
ctgatggatcatccggacttcaagactctggatttctccaccctcaagctcaccaactcc
ggcggcaccgcgctggtcaaggccaccgccgagcgttgggagcagatcaccggttgccgc
atcaccgaaggctacggcctgaccgaaacctcgccggtggcctgcaccaacccgtacggc
gagctgtcgcggatcggcacggtcggcctgccggttccgggcacccggttgaaagtcatc
aatgacgacggcgtcgagcagcctctgggcgagcgcggcgagctgtgcatcaagggcccg
cagatcatgaagggctactggcagaaacccgaggccaccgccgaggtgctggatgccgag
ggctggttcaagtccggcgacattgcagtcatcgacccggacggtttcgtgcgcatcgtc
gaccgcaagaaagacatgatcatcgtctccggtttcaacgtgtacccgaacgaaatcgaa
gacgtggtgatggcccacccgaaagtcgccaactgcgcagtgatcggcgtaccggacgaa
cgttccggcgaggcggtgaagctgtttgtggtggcgcgggaaaccggcgtgagcctggaa
gagctgaaggcttactgcaaagagaatttcacggcgtacaaggtgccgaaacacatcgtg
ctgcgtgagtcgttgccgatgacgcctgtcgggaaaattctgcggcgggagttgcgcgat
atcgcctga
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