Pseudomonas fitomaticsae: KJY40_23705
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Entry
KJY40_23705 CDS
T08740
Name
(GenBank) OprD family outer membrane porin
KO
K18093
imipenem/basic amino acid-specific outer membrane pore [EC:3.4.21.-]
Organism
pfit
Pseudomonas fitomaticsae
Pathway
pfit01501
beta-Lactam resistance
pfit02020
Two-component system
Module
pfit_M00745
Imipenem resistance, repression of porin OprD
Brite
KEGG Orthology (KO) [BR:
pfit00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
KJY40_23705
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
KJY40_23705
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pfit02000
]
KJY40_23705
01504 Antimicrobial resistance genes [BR:
pfit01504
]
KJY40_23705
Transporters [BR:
pfit02000
]
Other transporters
Pores ion channels [TC:
1
]
KJY40_23705
Antimicrobial resistance genes [BR:
pfit01504
]
Gene sets
beta-Lactam resistance modules
Imipenem resistance, repression of porin OprD [MD:
M00745
]
KJY40_23705
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OprD
DUF4136
Motif
Other DBs
NCBI-ProteinID:
UFP99013
LinkDB
All DBs
Position
5245501..5246847
Genome browser
AA seq
448 aa
AA seq
DB search
MRVMKWSMIALAVAAAASTQMATAAPFVSDQAEAKGFVEDAKADLLIRNYYFNRDNKDGA
RDVKDWTQGIWGNFSSGYTQGTVGVGVDAFGYLAIKLDGGAGTSGSGNMSRSNEFNANGS
RDPDDSQGKAGAAIKFRVSKTELKIGDMQPSTAPVFAVGGSRILPQTASGFQLQSSEIKD
LDLEAGHFYSATSQDRNSREGGLYATYAGVEANTIDYFGGKYGITENLSASLYGAKLEDI
WNQYYANVNLTTPFGGDTSLNTDFNIYRTTDTGSAKAGDISNTAFSLATALSFLKAHTIT
LAFQKVNGDTPFDYIGVGKNNRGGDSIFLANSIQYSDFNAPGEKSAQIRYDIKMAEYGVP
GLSFMTRYVKGWDIDGTHTPAGSAYAGLYGEDGKHNETNFEAKYVVQSGPAKDLSFRIRQ
AWHFANADEGEGDTKEFRLIVDYPLSLL
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgtgatgaagtggagcatgatcgcactggcagttgcagcagccgccagtactcag
atggctacggccgcaccgttcgtaagtgaccaggcagaagccaaaggcttcgttgaagac
gcgaaagctgatttgctgattcgcaactattacttcaaccgtgacaacaaagacggtgcc
cgtgacgttaaagactggacccagggtatctggggcaacttcagctccggttacacccaa
ggtactgttggcgtcggcgttgatgcgttcggctacctggccatcaaactggacggcggc
gccggcaccagcggctccggcaacatgagccgcagcaacgagttcaatgcaaacggttcc
cgcgaccctgacgacagccaaggcaaagccggcgctgccatcaagttccgcgtatcgaaa
accgagctgaaaatcggtgacatgcagcctagcaccgctccggtgttcgctgtcggcggc
tcccgtatccttccgcaaactgccagcggtttccaactgcagagcagcgagatcaaagac
cttgacctcgaagccggtcacttctactcggcaaccagccaggaccgcaactcccgtgaa
ggtggtctgtacgcgacctacgccggcgtcgaagccaacaccatcgactacttcggtggc
aagtacggcatcaccgaaaacctgagcgcatcgctctacggcgccaaactggaagacatc
tggaaccagtactacgccaacgtgaacctcaccactccattcggtggtgacacttcgctg
aacaccgacttcaacatctatcgcaccaccgacaccggtagcgcgaaagccggtgacatc
agcaacaccgcgttctccctggccaccgctctctcgttcctgaaagcgcacaccatcacc
ctggcgttccagaaggtcaacggcgacactccgttcgactacatcggcgtgggcaagaac
aaccgtggcggcgactcgatcttcctcgccaactccatccagtactctgacttcaacgcc
ccgggcgagaagtctgcccagatccgttacgacatcaaaatggccgagtacggcgttcca
ggtctgagcttcatgacccgctacgttaaaggctgggacatcgacggcacccacactcca
gcaggcagcgcctacgctggtctgtatggtgaagatggcaaacacaacgaaaccaacttc
gaagccaaatacgtagttcagtctggcccggccaaagacctgtccttccgtattcgtcag
gcctggcacttcgctaacgccgacgaaggtgaaggcgataccaaagagttccgtctgatc
gtcgactacccgctgtcgcttttgtaa
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