KEGG   Pseudomonas fitomaticsae: KJY40_23920
Entry
KJY40_23920       CDS       T08740                                 
Name
(GenBank) sigma-54 dependent transcriptional regulator
  KO
K10126  two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD
Organism
pfit  Pseudomonas fitomaticsae
Pathway
pfit02020  Two-component system
Brite
KEGG Orthology (KO) [BR:pfit00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    KJY40_23920
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02022 Two-component system [BR:pfit02022]
    KJY40_23920
Two-component system [BR:pfit02022]
 NtrC family
  DctB-DctD (C4-dicarboxylate transport)
   KJY40_23920
SSDB
Motif
Pfam: Sigma54_activat Response_reg Sigma54_activ_2 AAA_5 HTH_8 AAA FleQ Mg_chelatase OKR_DC_1_N MCM AAA_2 FtsK_SpoIIIE
Other DBs
NCBI-ProteinID: UFP99055
LinkDB
Position
5309818..5311146
AA seq 442 aa
MLNSVMVVDDESSIRNAVEQWLSLSGFEVQLFSRAEDCLAALPAHFAGVIVSDVRMPGLS
GLELLAEVQRRDADLPVILLTGHGDVPMAVEAMRDGAYDFLEKPFSPETLLGSLRRALDK
RRLVLENRALHEQADNRARLDATLLGVSRGLQTLRRQVLDLATLPVNVLIRGETGSGKEL
VARCLHDFGPRADKPFVALNCAAIPEQLFEAELFGHESGAFTGASGKRIGKLEYADGGTL
FLDEIESMPLAQQVKLLRVLQEQKLERLGSNQSIRVDLRIVAATKPDLLDEARAGRFRED
LAYRLNVAELRLPPLRDRREDIPLLFESFAQSAAQRLGRTFPPLSGAQLSHLLSHDWPGN
VRELANVAERQVLGLDEPVQGIDPGQSLAAQQEAFEAQCLRAALTRHKGDVKAVLEELQL
PRRTFNEKMQRHGLTREMFVPE
NT seq 1329 nt   +upstreamnt  +downstreamnt
atgctcaattcggtgatggtggtcgatgacgaaagcagcattcgcaatgccgttgagcaa
tggctgagcctgtcggggttcgaggtgcagctgttcagccgcgccgaggactgcctggcg
gcgctgcccgcgcattttgccggggtgattgtcagcgacgtgcgcatgcccgggcttagc
ggtcttgagttgctggccgaagtgcagcgccgggatgccgatctgccggtgattctgctg
accggtcacggcgatgtgccgatggcggtcgaagcgatgcgcgacggcgcctacgacttt
ctggaaaaacccttcagccccgagaccctgctcggcagcctgcgccgggcgctggacaag
cgtcggctggtgctggaaaaccgcgccctgcacgagcaggccgacaaccgcgccagactg
gatgcgacgctgctcggtgtgtcccgtggtttgcaaaccttgcgccggcaggtgctggat
ctggcgacgctgccggtcaacgtgctgatccgaggcgagaccggcagcggcaaggaactg
gtcgcccgctgcctgcacgacttcggcccccgcgccgacaagccgttcgtggcgctgaac
tgcgcggcgatccccgagcaactgttcgaagccgagttgttcgggcatgagagcggcgcg
ttcaccggcgcttcgggcaagcgcatcggcaagctggaatacgccgacggcggcacgctg
tttctcgatgaaatcgaaagcatgccgttggcccagcaggtgaaactgctgcgggtgttg
caagaacagaagctggagcggctagggtcgaaccagagcattcgggtggacctgcggatc
gtcgcggcgaccaaacccgacttgctggatgaagcccgggccgggcgttttcgcgaggac
ctggcgtatcgcctgaacgtcgccgagttgcgactgccgccgttgcgtgatcgtcgggaa
gacattccgttgttgttcgaatccttcgcccagagcgccgcccagcgcttggggcggacg
ttcccgccgctcagtggtgcgcagttgagtcacctgctgagtcatgactggccgggtaat
gtgcgcgagttggcgaacgttgccgagcggcaggtgctggggctggatgaaccggtgcag
ggtatcgatccgggtcagtcgctggcggcgcagcaggaagcgtttgaggcgcagtgtttg
cgggctgccttgacacggcacaagggggatgtgaaagccgtgctggaagaactgcaactg
ccccggcgcaccttcaatgaaaagatgcagcggcatggtttgacccgggaaatgttcgta
cccgaatga

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