Pseudomonas fitomaticsae: KJY40_24130
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Entry
KJY40_24130 CDS
T08740
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
pfit
Pseudomonas fitomaticsae
Pathway
pfit03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pfit00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
KJY40_24130 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pfit03019
]
KJY40_24130 (groL)
03110 Chaperones and folding catalysts [BR:
pfit03110
]
KJY40_24130 (groL)
03029 Mitochondrial biogenesis [BR:
pfit03029
]
KJY40_24130 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pfit04147
]
KJY40_24130 (groL)
Enzymes [BR:
pfit01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
KJY40_24130 (groL)
Messenger RNA biogenesis [BR:
pfit03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
KJY40_24130 (groL)
Chaperones and folding catalysts [BR:
pfit03110
]
Heat shock proteins
HSP60 / Chaperonin
KJY40_24130 (groL)
Mitochondrial biogenesis [BR:
pfit03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
KJY40_24130 (groL)
Exosome [BR:
pfit04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
KJY40_24130 (groL)
Exosomal proteins of other body fluids (saliva and urine)
KJY40_24130 (groL)
Exosomal proteins of breast cancer cells
KJY40_24130 (groL)
Exosomal proteins of colorectal cancer cells
KJY40_24130 (groL)
Exosomal proteins of bladder cancer cells
KJY40_24130 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
UFP99095
LinkDB
All DBs
Position
complement(5354914..5356557)
Genome browser
AA seq
547 aa
AA seq
DB search
MAAKEVKFGDSARKKMLVGVNVLADAVKATLGPKGRNVILAKSFGAPTITKDGVSVAKEI
ELKDAFENMGAQLVKDVASRANDDAGDGTTTATVLAQAIVNEGLKAVAAGMNPMDLKRGI
DKATIAIVKELKAQSKPCADTKAIAQVGTISANSDSSIGDIIAEAMEKVGKEGVITVEEG
SGLENELSVVEGMQFDRGYLSPYFVNKPDTMVAELDGPLILLVDKKISNIREMLPVLEAV
AKAGRPLLIVAEDVEGEALATLVVNNMRGIVKVAAVKAPGFGDRRKAMLQDIAVLTGGTV
ISEEIGLSLESTTLEHLGNAKRVTLNKETTVIVDGAGNEGDIQARVVQIRAQVEETSSDY
DREKLQERLAKLSGGVAVIKVGAGSEVEMKEKKARVEDALHATRAAVEEGVVPGGGVALV
RSLQAIADLKGDNEDQNVGIQLLRRAVEAPLRQIVANSGDEPSVVVDKVKQGSGNFGYNA
ATGEYGDMIEMGILDPAKVTRSALQAASSIASLMITTEAMVADIAEDKPAMGGMPDMGGM
GGMGGMM
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atggctgctaaagaagttaaattcggcgattccgcccgcaagaaaatgctggttggcgta
aacgtcctggctgacgcggtaaaagcgaccctgggcccgaaaggccgtaacgtgatcctg
gcaaaaagctttggcgctccgaccatcaccaaggacggcgtttccgttgccaaggaaatc
gaactgaaagacgcctttgaaaacatgggcgctcagttggtcaaagacgttgcttcgcgc
gccaacgatgacgcaggcgacggcaccaccaccgctaccgtactggcccaggccatcgtc
aacgaaggcttgaaagccgtcgctgccggcatgaacccgatggacctgaagcgcggcatc
gacaaggcgaccatcgccatcgtcaaagagctgaaagctcagtccaagccatgtgcagac
accaaggcaatcgcccaggtcggcactatttccgccaactccgacagctccatcggcgac
atcattgccgaagccatggaaaaagtcggtaaagaaggcgtgatcaccgtcgaagaaggc
tcgggcctggaaaacgaactgtcggttgtagaaggcatgcagttcgaccgtggctacctg
tctccgtacttcgtcaacaagccggacaccatggttgccgagctcgacggcccgctgatc
ctgctggtcgacaagaagatctcgaacatccgcgaaatgctgccagtgctggaagctgtt
gccaaagccggccgtccgctgctgatcgttgccgaagacgttgaaggcgaagccctggcg
actctggtcgtgaacaacatgcgtggcatcgttaaagtcgcagccgtcaaggctccaggc
ttcggcgaccgtcgcaaggccatgctgcaggacatcgccgttctgaccggcggtaccgtg
atctccgaagagatcggcctgagcctggaaagcaccaccctggaacacctgggcaacgcc
aagcgcgtgaccttgaacaaggaaaccaccgttattgttgacggtgccggcaacgaaggc
gacattcaggctcgcgttgtacagatccgcgcccaagtcgaagaaacctcttcggactac
gaccgtgaaaaactgcaagagcgtctggccaaactgtccggcggcgttgcggtgatcaag
gttggcgccggctccgaagttgaaatgaaagagaagaaagcccgcgttgaagacgccctg
cacgcaacccgcgcagccgttgaagaaggcgtggtacctggcggtggtgttgcgctggtg
cgctcgctgcaagccattgctgatctgaaaggcgacaacgaagaccagaacgttggtatt
cagttgctgcgtcgcgctgttgaagcgcctctgcgccagatcgttgccaactccggtgac
gagccaagcgtggttgtcgacaaggtcaagcagggttcgggtaacttcggttacaacgct
gctaccggcgaatacggcgacatgatcgaaatgggcattctggacccggctaaagtgact
cgttcggctctgcaagcggcttcgtcgattgccagcctgatgattaccactgaagcgatg
gttgccgacattgccgaagacaagccagccatgggcggtatgccagacatgggcggcatg
ggtggtatgggcggcatgatgtaa
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