Pseudomonas fitomaticsae: KJY40_24635
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Entry
KJY40_24635 CDS
T08740
Symbol
der
Name
(GenBank) ribosome biogenesis GTPase Der
KO
K03977
GTPase
Organism
pfit
Pseudomonas fitomaticsae
Brite
KEGG Orthology (KO) [BR:
pfit00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pfit03009
]
KJY40_24635 (der)
Ribosome biogenesis [BR:
pfit03009
]
Prokaryotic type
GTPases
KJY40_24635 (der)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MMR_HSR1
FeoB_N
KH_dom-like
GTP_EFTU
Dynamin_N
AIG1
RsgA_GTPase
Roc
ABC_tran
AAA_22
Ras
DUF5906
AAA_24
AAA_18
SRPRB
NTPase_1
cobW
NOG1
Nuc_deoxyri_tr2
AAA_14
RHD3_GTPase
Motif
Other DBs
NCBI-ProteinID:
UFP99191
LinkDB
All DBs
Position
complement(5478334..5479806)
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AA seq
490 aa
AA seq
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MVPVIALVGRPNVGKSTLFNRLTRTRDAIVGDLSGLTRDRQYGEAKWQGRSYILIDTGGI
SGDEHGMDEKMAEQSLLAIEEADVVLFLVDAKAGFTAADQMIGEHLRKRNKRSFVVANKV
DNIDPEMARAEFAPMGMGDAIPIAGAHGRGISNLLEIALSEFPKDAEEPQEGEEQEEVAE
GEEAKRIPGPSEKDGIKIAIIGRPNVGKSTLVNRMLGEERVIVYDQPGTTRDSIYIPFER
NEEKYTLIDTAGVRKRGKIHEEVEKFSVVKTLQAIKDANVVIFVMDAREGVVDHDLNLLG
FALESGRAMVIALNKWDGMTPGERDYVKTELERRLFFVDFADIHFISALHGTGVGNLYGS
VQNSFKSAVTRWPTSRLTQILEDAVSEHQPPMVNGRRIKLRYAHLGGANPPLIVIHGNQI
EKVPNSYVRYLENTYRRVLKLVGTPIRIEFKGGENPYEGNKNTLTDRQVNKKRRLMSHNK
KASKKRRDKK
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atggttcccgtaatcgccctggtgggccgaccgaacgtcggcaagtccaccttgttcaac
cgcctgaccaggactcgcgacgccatcgtcggcgacttgtccggtctgacccgtgatcgc
cagtacggtgaggccaagtggcaagggcgttcctacattctgatcgacaccggcggtatc
tccggtgacgagcatggtatggacgaaaaaatggccgagcagtcgctgctggccatcgaa
gaagcggatgtcgttctgttcctggtagatgccaaggccggtttcactgcagcagaccag
atgatcggcgagcacttgcgcaagcgtaacaagcgttcgttcgtggtggccaacaaggtc
gacaacatcgatccggaaatggcccgcgccgaattcgctccgatgggcatgggcgatgcg
attccgatcgccggcgcccatggccgtggcatcagcaatctgctggaaatcgccttgagc
gagttcccgaaggatgcagaagagccgcaggaaggcgaagaacaggaagaagttgccgaa
ggcgaggaagccaagcgcattcctggtccgagcgagaaggatggcatcaagatcgccatc
atcggtcgtcccaacgtcggcaaatcgacactggtcaaccgcatgctcggcgaagagcgg
gtgatcgtttacgatcagccgggtaccactcgtgacagcatctatattcccttcgaacgc
aatgaagagaagtacacgctgatcgatactgccggtgtgcgcaaacgcggcaagatccac
gaagaagtcgaaaagttttccgtggtcaaaaccctgcaggccatcaaagacgccaacgtg
gtgatcttcgtgatggatgcccgcgaaggggtggtcgatcacgacctcaacctgctgggc
ttcgctcttgagtcggggcgtgcgatggtcattgctctcaacaagtgggatggcatgaca
ccaggcgagcgcgactatgtgaagactgagctggagcgccggttgttcttcgtcgacttc
gccgacatccacttcatctcggcgctgcacggtacaggcgtgggtaatctctacggttcg
gtgcagaactcgttcaagtcagcggtcacccgctggccgaccagccgcctgacccagatc
ctcgaagacgcagtcagcgagcaccagccgccgatggtcaacggtcgtcgaatcaagttg
cgctacgctcacctcggtggcgcgaacccgccactgatcgtgatccacggcaaccagatc
gagaaggtgccgaactcatacgtgcgctatctggaaaacacttaccgccgtgtactcaaa
ctggtcggcacgccgatccgtatcgagttcaagggcggcgagaacccgtacgaaggcaac
aagaacacgctgaccgaccgccaggtcaacaagaagcgtcgtttgatgtcgcacaacaag
aaagccagcaagaagcgccgcgacaagaagtaa
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