Pseudomonas fitomaticsae: KJY40_25945
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Entry
KJY40_25945 CDS
T08740
Name
(GenBank) sigma-54 dependent transcriptional regulator
KO
K02667
two-component system, NtrC family, response regulator PilR
Organism
pfit
Pseudomonas fitomaticsae
Pathway
pfit02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
pfit00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
KJY40_25945
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
pfit02022
]
KJY40_25945
02035 Bacterial motility proteins [BR:
pfit02035
]
KJY40_25945
Two-component system [BR:
pfit02022
]
NtrC family
PilS-PilR (type 4 fimbriae synthesis)
KJY40_25945
Bacterial motility proteins [BR:
pfit02035
]
Pilus system
Twitching motility proteins
KJY40_25945
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
AAA_lid_14
HTH_8
AAA_5
HTH_50
Mg_chelatase
Pre_tape_measure
HTH_30
AAA_16
VpsR
AAA_19
AAA_22
Motif
Other DBs
NCBI-ProteinID:
UFP99419
UniProt:
A0ABY3Q044
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All DBs
Position
5742935..5744281
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AA seq
448 aa
AA seq
DB search
MNTSPRQKILIVDDEPDIRELLEITLGRMKLDTFSARNLAEAQTLLYRETFDLCLTDMRL
PDGSGLELVQHIQQRYPQLPVAMITAYGSLETAINALKAGAFDFLTKPVDLTRLRELVGS
ALRMPAPGNVCTSIDRRLLGDSPPMRNLRKQIDKLARSQAPVYISGESGSGKELVARLIH
EQGPRASQPFVPVNCGAIPSELMESEFFGHRKGSFSGAVEDKPGLFQAAHGGTLFLDEVA
DLPLPMQVKLLRAIQEKAVRSVGGQQETVVDVRILCATHKDLDAEVAAERFRQDLYYRLN
VIELRVPSLRERREDIEALAGHMLKRLANGTGQPAARLHPHALEALKNYRFPGNVRELEN
VLERAHTLCENRTIEAEDLRLIEGNGTAEGGVADLTQIDNLEDYLESVERKLILQALEET
RWNRTAAAQRLSLSFRSMRYRLKKLGLD
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
ttgaacacgagcccacggcaaaaaatcctcatcgtcgacgacgagccggatattcgcgaa
ctcctggaaatcaccctgggacggatgaaactcgacaccttcagcgcacgcaatctcgca
gaagcccagacgctgctgtaccgcgagaccttcgacctgtgcctgaccgacatgcgcctg
cccgacggctccggcctggagctggtgcagcacattcagcaacgttatccgcaactgcca
gtggcgatgatcaccgcctacggcagcctggaaacggcgatcaacgccctgaaagccggg
gctttcgacttcctgaccaaaccggtggacctgacacgcctgcgcgagctggtcggctcg
gcgttgcgcatgccggcgccgggcaatgtctgcacctcgatcgatcggcgattgctcggc
gattcgccgccgatgcgcaacctgcgcaaacagatcgacaaactggcccgcagccaggca
ccggtctacatcagcggcgaatccggcagcggcaaggaactggtggcccgattgattcat
gaacagggcccgcgtgccagccagccattcgtgccggtgaactgcggggcgattccttct
gagttgatggagagcgagttcttcggccatcgcaaaggcagtttcagcggtgcggtggaa
gataaaccggggctgtttcaggcggcccatggcggcacactgtttctcgatgaagtggcg
gatctaccgctgccgatgcaggtcaagctgctgcgggcgatccaggaaaaagccgtgcgc
agcgtcggtggccaacaggaaaccgtggtcgatgtgcgcatcctctgcgcgacgcacaag
gatctcgacgctgaagtggctgccgagcgttttcgtcaggatctgtattaccggctgaac
gtgatcgaactgcgcgtaccgtccctgcgcgaacgtcgcgaggacatcgaagcactggcc
ggccatatgctcaagcgcctggccaatggcaccgggcagccggcggcacgccttcatcct
catgccctcgaggcgctgaaaaactaccgttttccgggcaacgtgcgagagctggagaac
gtgcttgagcgggcgcataccctgtgtgaaaaccgcacgatcgaggccgaggatttacgc
ctgatcgaaggtaatggcaccgccgagggcggcgttgccgatctcacgcagatcgacaac
ctggaagactatctggaaagcgtcgagcgcaaactgattctgcaggcactggaagaaacc
cgctggaatcgcacggcggcggcgcagcggttgagtctgtcgtttaggtcgatgcgctac
aggctcaagaaactgggtctggattaa
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