Pseudomonas fitomaticsae: KJY40_26170
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Entry
KJY40_26170 CDS
T08740
Symbol
radA
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
pfit
Pseudomonas fitomaticsae
Brite
KEGG Orthology (KO) [BR:
pfit00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pfit03400
]
KJY40_26170 (radA)
DNA repair and recombination proteins [BR:
pfit03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
KJY40_26170 (radA)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
ChlI
Lon_C
AAA_16
AAA_22
DnaB_C
GvpD_P-loop
AAA
RecA
SLFN-g3_helicase
AAA_14
nSTAND3
AAA_24
Rad51
NTPase_1
DUF7125
ABC_tran
MCM
DUF7129
Motif
Other DBs
NCBI-ProteinID:
UFP99461
LinkDB
All DBs
Position
complement(5792187..5793554)
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AA seq
455 aa
AA seq
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MAKAKRMYGCTECGATFPKWAGQCGECGAWNTLTETMVESGGAAAPSGRTGWAGQQAQIK
TLAEVSIEEIPRFSTASGELDRVLGGGLVDGSVVLIGGDPGIGKSTILLQTLCNLAKSMP
ALYVTGEESQQQVAMRARRLGLPQDQLRVMTETCIETIIATARQEKPKVMVIDSIQTIFT
EQLQSAPGGVSQVRESAALLVRYAKQSGTAIFLVGHVTKEGALAGPRVLEHMVDTVLYFE
GESDGRLRLLRAVKNRFGAVNELGVFGMTDKGLKEVSNPSAIFLTRAQEEVPGSVVMATW
EGTRPMLVEVQALVDDSHLANPRRVTLGLDQNRLAMLLAVLHRHGGIPTHDQDVFLNVVG
GVKVLETASDLALMAAVMSSLRNRPLPHDLLVFGEVGLSGEVRPVPSGQERLKEAAKHGF
KRAIVPKGNAPKEAPPGLQIIAVTRLEQALDSLFE
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atggccaaggccaagcgcatgtacggctgcaccgagtgcggcgcaacctttcccaagtgg
gccgggcagtgcggcgaatgcggcgcctggaacaccctgaccgaaaccatggtcgagagc
ggcggtgccgccgcgccgagcgggcgcaccggctgggccggacagcaggcccagatcaag
accctggccgaagtcagcatcgaagaaattccgcgtttttccacagcctccggcgagctc
gaccgagtgctcggcggtggtctggtggacggttcggtggtgctgatcggcggtgacccc
ggcatcggcaaatcgacgattctgttacagaccctgtgcaacctcgccaagagcatgccg
gcgctgtacgtcacaggcgaagagtcccagcagcaggtcgccatgcgtgcacgccgcctg
ggcctgccgcaggatcaactgcgggtcatgaccgaaacctgtattgaaaccatcatcgcc
accgcccgccaggaaaaacccaaggtgatggtgatcgactcgatccagacgatcttcacc
gaacaactgcaatcggcaccgggcggcgtgtcccaggtacgcgaaagtgcggcgttgctg
gtgcgctatgccaagcaaagcggcacggcgattttcctggtcggccacgtgaccaaggag
ggcgcgctcgccgggccgcgggttctggagcacatggtcgataccgtgctgtatttcgaa
ggcgagtccgacgggcggttgcgcctgctgcgggctgtgaagaaccgtttcggcgcggtc
aacgaactcggcgttttcggcatgaccgacaagggcctgaaagaagtctccaacccttca
gcgatttttctcacccgcgctcaggaggaagttccgggcagcgtggtcatggcgacgtgg
gaaggcacccggccgatgctggtggaagtccaggcgctggtggatgacagccatctggcc
aacccgcgtcgggtcacgctgggtctggatcagaaccgtctggcgatgttgctggcggtg
ctgcaccgtcatggcggcattccgacccacgatcaggacgtgttcctcaacgtggtcggc
ggggtgaaggtgctggaaaccgcgtctgacctggcgttgatggccgccgtcatgtcgagc
ctgcgcaaccgtccgttgccccatgacttgctggtgttcggtgaagtcggcctgtccggc
gaagtgcgtccggtgccgagcggtcaggagcgtttgaaggaagccgccaagcacggcttc
aagcgcgcgatcgtgcccaagggcaatgcgccgaaggaagcgccgccaggtttgcagatc
attgcagtgacgcgtcttgagcaggcgctggactcgctgttcgagtga
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