Pseudomonas fitomaticsae: KJY40_26245
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Entry
KJY40_26245 CDS
T08740
Symbol
trmA
Name
(GenBank) tRNA (uridine(54)-C5)-methyltransferase TrmA
KO
K00557
tRNA (uracil-5-)-methyltransferase [EC:
2.1.1.35
]
Organism
pfit
Pseudomonas fitomaticsae
Brite
KEGG Orthology (KO) [BR:
pfit00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pfit03016
]
KJY40_26245 (trmA)
Enzymes [BR:
pfit01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.35 tRNA (uracil54-C5)-methyltransferase
KJY40_26245 (trmA)
Transfer RNA biogenesis [BR:
pfit03016
]
Prokaryotic type
tRNA modification factors
Methyltransferases
KJY40_26245 (trmA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_25
Methyltransf_31
Methyltransf_4
Cons_hypoth95
Methyltransf_11
Methyltransf_12
MTS
RrnaAD
DREV
Methyltransf_15
TRM5-TYW2_MTfase
Ubie_methyltran
PrmA
Motif
Other DBs
NCBI-ProteinID:
UFP99474
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All DBs
Position
5806725..5807804
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AA seq
359 aa
AA seq
DB search
MTFDSQAYAAQLEDKVTRLRDLLAPFDAPEPTVFDSPLQNFRLRAEFRLWREGGERHYAM
FSQDDKRTPILIEEFPIASLRINQLMPQLKAAWQASAALSHKLFQVEFLTTLAGDAMITL
CYHRPLDEHWHAAATQLAADLGVSIIGRSKGKREVLGLDYVVEKLDVGGRTFSYRQPEGA
FTQPNGTVNQKMLNWAYEALGNRSDDLLELYCGNGNFTLPLATRVRKVLATEISKTSVNA
ALSNLAENAVDNVTLVRLSAEELTEALNEVRPFRRLHGIDLKSYEFGSVFVDPPRAGMDP
DTCELTRRFDNILYISCNPETLAANIAQLHDTHRITRCALFDQFPWTHHMESGVLLTRR
NT seq
1080 nt
NT seq
+upstream
nt +downstream
nt
atgacttttgattcccaggcctacgccgcacaactcgaagacaaggtcacgcgcctgcgt
gacctgctggccccgttcgatgcaccggagccgacggtgttcgactcgccgctgcagaac
ttccgtctgcgcgccgaatttcgcctgtggcgcgagggcggcgagcggcattacgcgatg
ttttcccaggacgacaaacgcacaccgatcctgatcgaagagttcccgatcgccagcctg
cgcatcaaccagttgatgccgcaattgaaagcggcctggcaggccagcgcggcgctgagc
cacaagctgtttcaggtggagtttctgaccaccctggccggcgacgcgatgatcaccctg
tgctatcaccgtccgctggacgagcactggcacgcggcagccacccaactggcggcggat
ctgggcgtcagcatcatcggtcgatccaagggcaagcgcgaagtgctcggcctcgattac
gtggtcgagaaactcgacgtcggcggtcgcacattcagctatcgccaaccggaaggcgcg
ttcacccagcccaacggcaccgtgaaccagaagatgctcaactgggcatacgaagcactg
ggcaatcgcagcgacgatctgctggagctgtactgcggcaacggcaacttcaccctgccg
ctggcgactcgcgtgcgcaaagtgctggccaccgaaatcagcaagacctcggtcaacgcc
gcgctgagcaacctggccgaaaacgctgtggataacgtcaccctggtgcgcctgtccgcc
gaagagctgaccgaagccctgaacgaagttcgcccgttccgtcgcctgcacggtatcgac
ctgaaaagctacgagttcggcagcgtgttcgtcgacccgccacgggccggcatggacccg
gatacctgcgaactgacccgtcgcttcgacaacatcctgtacatctcctgcaacccggag
accctggcagccaacatcgcccaactgcacgacacacaccgcatcacccgctgcgcgctg
ttcgaccagttcccgtggactcaccacatggaatccggcgtgttgctgacccgacgttga
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