Pseudomonas fitomaticsae: KJY40_26600
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Entry
KJY40_26600 CDS
T08740
Symbol
mrdA
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
pfit
Pseudomonas fitomaticsae
Pathway
pfit00550
Peptidoglycan biosynthesis
pfit01100
Metabolic pathways
pfit01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
pfit00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
KJY40_26600 (mrdA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
KJY40_26600 (mrdA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pfit01011
]
KJY40_26600 (mrdA)
Enzymes [BR:
pfit01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
KJY40_26600 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:
pfit01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
KJY40_26600 (mrdA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
Motif
Other DBs
NCBI-ProteinID:
UFP99542
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All DBs
Position
complement(5880689..5882584)
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AA seq
631 aa
AA seq
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MSQPIRIKDHEKDARLVRGRVVFGAIAVVALICVLIARLYYLQVIQYEYHSTLSENNRVH
VQPIPPTRGLIFDRNGVVVADNRPSFSLSMTRERSGDWQQVLDVIVEVLELTPEDRVIFE
KRMRQGRRPFEPVPILFELSEEQIARIAVNQFRLPGVEVVAQLVRHYPQGAHFAHSVGYM
GRINEKELKTLDPVNYSGTHHIGKTGIERFYEAELHGQVGYEEVETNARGRVLRVLKRTD
PVPGKDIVLSLDIKLQEAAEAALGGRRGAVVALDPKTGEVLAMVSQPSFDPNLFVTGISF
KAYAELRDSIDRPLFNRVLRGLYPPGSTIKPAVAIAGLDAGVVTASSRVFDPGYYMLPNY
DHKYRNWNRTGDGFVDLDTAIMRSNDTYFYDLAHKLGIDRLSAYMNKFGIGQKVSLDMFE
ESPGLMPSREWKRATRKQAWFPGETLILGIGQGYMQSTPLQLAQATALVANKGVWNRPHL
AKSLEGVKPVDENPMPDIILRDPSDWTKVNHGMQQVMHGARGTARKAAIGAQYRIAGKSG
TAQVVAIKQGEKYDRSKVQERHRDHALFVGFAPADDPKIVVSVMVENGESGSGVAAPVVR
QVMDAWLLDQDGRLKAEYASPISAEATARDE
NT seq
1896 nt
NT seq
+upstream
nt +downstream
nt
atgtctcagccgatccgcatcaaggaccacgaaaaagacgcccgtctggtgcgtggtcgc
gtcgtgttcggcgcaattgcggtggtggcgctgatctgcgtgctgattgcgcggctgtat
tacctgcaggtgattcagtacgaatatcactcgaccctgtcggaaaacaaccgggttcac
gttcagccgatcccgccgacccgtggcctgattttcgaccgcaacggcgtggtggtggcg
gacaaccgtccgagcttcagcctgagcatgacccgcgagcgctccggcgactggcaacag
gtgctcgacgtgatcgtcgaggtgctggagctgacgccggaagaccgggtgatcttcgag
aaacgcatgcgtcagggccgccggccgttcgagccggtgccgatcctgttcgagctgagc
gaagagcagatcgcccggatcgcggtgaaccagttccgcctgccgggcgtcgaggtggtc
gcgcaactggtccgtcattacccgcagggtgcgcacttcgcgcactcggtgggttacatg
gggcggatcaacgagaaagagctcaagactctcgatccggtcaactacagcggcacccac
cacatcggcaagaccggcatcgagcgcttctatgaagccgagctgcacggtcaggtgggt
tacgaagaggtcgagaccaacgcccgtggccgcgtcctgcgcgtgctcaagcgtaccgat
ccggtgccgggcaaggacattgtcctgagcctcgacatcaaattgcaggaagccgccgag
gctgcgctgggcggtcgtcgtggcgcggtggtggcgctcgatccgaaaaccggcgaggtg
ctggcgatggtcagccagccgagcttcgacccgaacctgttcgtcaccggcatcagcttc
aaggcttacgccgagctgcgtgattcgatcgaccggccactgttcaaccgcgtgttgcgc
ggtctgtacccgccgggttcgacgatcaagccggcggtcgcgattgccggtctcgacgcg
ggcgtggtgacggcatcgagccgggtgttcgaccccggttactacatgctgcccaactac
gatcacaaataccgcaactggaaccgcaccggggacggcttcgtcgacctcgacacggcg
atcatgcggtccaacgacacctatttctatgacctggcgcacaagctgggcatcgaccgg
ttgtcggcctacatgaacaagttcggcatcggccagaaggtctcgctggacatgttcgaa
gaatcccccggcctgatgccgtcccgcgagtggaaacgcgccactcgcaaacaggcgtgg
ttccctggcgaaaccctgattctcgggatcggccagggctacatgcaatcgactccgctg
caactggcccaggccacggcgctggtggccaacaagggcgtgtggaaccgtccgcacctg
gccaaatccctcgaaggcgtgaagccggtggatgagaatccgatgccggacatcatcctg
cgcgatccgtcggactggaccaaggtcaaccatggcatgcaacaggtgatgcacggtgca
cggggtacggcgcgtaaagcggccatcggcgcgcaataccggatcgccggcaagtcgggt
acggcgcaggtcgtggcgatcaagcaaggtgaaaagtacgaccgctccaaggttcaggag
cgccaccgcgaccacgccttgttcgtcggttttgcgccggcggatgacccgaaaatcgtg
gtgtcggtgatggtcgaaaacggtgagtccggttccggcgtcgcggcaccggtggtgcgg
caggtcatggatgcctggctgctggatcaggacggacggttgaaggccgaatacgccagc
cctatcagtgcggaggctacggcccgtgatgaataa
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