Pseudomonas fitomaticsae: KJY40_26695
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Entry
KJY40_26695 CDS
T08740
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
pfit
Pseudomonas fitomaticsae
Brite
KEGG Orthology (KO) [BR:
pfit00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pfit03000
]
KJY40_26695
Transcription factors [BR:
pfit03000
]
Prokaryotic type
Helix-turn-helix
Other families
KJY40_26695
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
HTH_8
Sigma54_activ_2
AAA_lid_14
GAF
PAS_4
AAA_5
AAA_2
HTH_7
HTH_23
HTH_30
HTH_50
PAS_8
AAA
PAS_9
HVO_A0261_N
HTH_17
PAS
HTH_22
RWP-RK
Diguanyl_cycl_sensor
HTH_AraC
Mg_chelatase
HTH_28
HTH_20
IclR_C
nSTAND3
dnstrm_HI1420
Motif
Other DBs
NCBI-ProteinID:
UFP99559
UniProt:
A0ABY3Q050
LinkDB
All DBs
Position
complement(5903178..5905094)
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AA seq
638 aa
AA seq
DB search
MHDNHLSRHAQQVLTVTQGKPHLHGPGADPSIARSWLRCLEDYHLDPALTMAPTVLEHGR
VLESRERLQQVLQIAGNEMSSLHQQLSGAGHAVLLTDARGVILNCVTAPAERKIFERAGL
WLGSDWSEACEGTNGIGTCLVERQALTIHQDEHFRGRHTGLTCSASPVFDPHGELLAVLD
VSSARHDVSRQSQFHTMALVNLSAKMIESCYFLRCFDNQWLLRFHLQAESVGLFSEGLLA
FDGEGRISAVNQSALNLLGHIRGGLLGKPVEAFFDCSLDELLGRASANASASWPLRTRDG
RHLFAVLRGETRRPLPVAPVPAPVEVPRLAGICLGDAALQTDFRKALRVFERDVPLLING
ETGSGKEAFAKAVHSTSQRAGKAFVALNCAAIPESLIESELFGYRGGSFTGARKDGMRGK
LQQADGGTLFLDEIGDMPLALQTRLLRVLEDRQVVPIGGEPEAVNVRIISATHRNLLERV
GDGSFREDLYYRLNGLEVALPPLRERSDKSQLLDFLLAEEAGGEAILIDEPARQALLGFN
WPGNVRQMRNVLRTLAALCDEGRIGLDDLPAMFRQVQPLLVKVDEASSGQPLEDAERLAL
LNALEHTRWHMTHTAEQLGVSRNTLYRKLRKHGIARSA
NT seq
1917 nt
NT seq
+upstream
nt +downstream
nt
atgcacgacaaccatttgagtcgccatgcccaacaggttctcaccgtcacccagggcaag
ccgcacctgcatggccccggtgccgacccgtcgattgcccgctcgtggctgcgttgtctt
gaggactatcacctcgacccggccctgaccatggcgccgaccgtgctcgaacacggccgc
gttctcgaaagccgcgaacggctgcaacaggtgttgcagatcgccggcaatgaaatgagc
agcctgcatcaacaactctccggcgccggccacgcggtactgctgaccgacgcgcgcggg
gtgatcctcaactgcgtcaccgctcccgccgaacgcaagatcttcgaacgcgccggcctg
tggctgggttccgactggagcgaggcctgcgagggcaccaatggcatcggcacctgcctt
gtcgagcgtcaggccctgacgattcatcaagacgaacactttcgcggccgccacaccggc
ctgacctgctcggcaagcccggtgttcgacccgcacggcgaactgctggcggtgctcgat
gtttcctccgcgcgccatgacgtctcgcgccagagccagttccacaccatggcgctggtc
aatctgtcggcgaagatgatcgagagctgctacttcctgcgctgtttcgataaccaatgg
ttgctgcgtttccatctccaggccgagtccgtcgggctgttcagcgaagggctgctggcg
tttgacggggaagggcggatcagtgcggtcaatcagagcgcactgaacctgctcgggcac
attcgtggcggcttgctcggcaaaccggtggaggcgtttttcgactgttcacttgatgag
ttgctggggcgtgcgagtgccaatgccagcgccagttggccgctgcgcacccgggacgga
cggcatctgtttgcggtgctgcgcggcgaaacacgtcggccgctgccggtagcaccggtt
cctgcgcctgtcgaagtgccgcgtcttgcgggcatttgtctgggcgacgctgcgttgcag
acggatttccgcaaggccttgcgggtgttcgagcgtgacgttccactgctgatcaatggc
gaaaccggctccggcaaggaagcgttcgccaaggctgtgcacagcaccagtcaacgcgcc
ggcaaagccttcgtcgccctcaactgcgcggcaattcccgagagcctgatcgagagcgag
ctgttcggttatcgcggcggcagcttcaccggcgcgcgtaaggacggcatgcgcggcaag
ttgcagcaggccgatggcggcacgctgttcctcgatgaaatcggcgacatgccgctggcc
ttgcagacccgtctgctgcgagtgctggaagaccggcaagtggtgccgatcggcggcgag
ccggaggcggtcaacgtgcggatcatcagcgccacccaccgcaatctgctggagcgggtt
ggcgacggcagtttccgggaagacctttactaccggctcaacgggctggaagtggcgctg
ccgccgttgcgcgagcgcagtgacaagtcgcagctgctggatttcctgctggccgaagag
gcgggcggggaagcgatcctgatcgacgagccggcgcgtcaggcgctgctcgggttcaac
tggccgggcaacgtgcggcagatgcgcaatgtgctgcgcacgctggcggcgttgtgcgat
gaagggcggatcgggctggatgatctgcctgcgatgttccggcaagtgcagccgctgttg
gtcaaagtcgatgaggcatcgtccggacagccgctggaggatgccgaacggctggcgttg
ctcaatgctttggaacacacgcgctggcacatgacccacacggccgagcagcttggcgtc
agtcgcaacaccctttatagaaagctgcgcaaacacggaatcgcccgcagcgcctga
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